Mercurial > repos > tduigou > icfree_plates_designer
changeset 6:e76c8e7feffb draft default tip
planemo upload for repository https://github.com/brsynth/icfree-ml commit 9ac6ff08b3b98534f42ecfcecefa438ead21168c
| author | tduigou |
|---|---|
| date | Tue, 17 Dec 2024 13:41:05 +0000 |
| parents | 8cacb4b6edbd |
| children | |
| files | macros.xml test-data/calibrator.extractor_output.1.csv test-data/calibrator.input.sampling.csv test-data/calibrator.input.sampling.tsv |
| diffstat | 4 files changed, 345 insertions(+), 1037 deletions(-) [+] |
line wrap: on
line diff
--- a/macros.xml Fri Nov 22 11:37:19 2024 +0000 +++ b/macros.xml Tue Dec 17 13:41:05 2024 +0000 @@ -1,5 +1,5 @@ <macros> - <token name="@TOOL_VERSION@">2.5.2</token> + <token name="@TOOL_VERSION@">2.6.0</token> <token name="@VERSION_SUFFIX@">0</token> <xml name="requirements"> <requirements> @@ -9,13 +9,7 @@ </xml> <xml name="citation"> <citations> - <citation type="bibtex"> - @unpublished{icfree - author = {Joan Hérisson, Yorgo El Moubayed}, - title = {{icfree}}, - url = {https://github.com/brsynth/icfree-ml/}, - } - </citation> + <citation type="doi">10.1101/2024.10.28.619828</citation> </citations> </xml> <xml name="creator">
--- a/test-data/calibrator.extractor_output.1.csv Fri Nov 22 11:37:19 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,343 +0,0 @@ -Mg-glutamate,K-glutamate,Spermidine,3-PGA,NTP,HEPES,Amino acid,DNA 1,DNA 2,PEG-8000,Fluorescence Value 1,Fluorescence Average -105.04000000000002,350.0,52.52000000000001,168.78,100.96,262.5,1094.0,239.478,1485.0,524.8000000000001,36140,36140.0 -131.3,350.0,78.78,225.04,75.72,262.5,875.2,239.478,1232.55,524.8000000000001,8700,8700.0 -52.52000000000001,210.0,131.3,112.52,50.48,262.5,1094.0,239.478,1485.0,524.8000000000001,3278,3278.0 -105.04000000000002,280.0,105.04000000000002,225.04,50.48,262.5,1094.0,960.78,1485.0,524.8000000000001,20109,20109.0 -105.04000000000002,210.0,105.04000000000002,281.3,126.2,262.5,1094.0,717.0,994.95,262.40000000000003,22265,22265.0 -52.52000000000001,350.0,131.3,168.78,50.48,262.5,875.2,473.22,1232.55,262.40000000000003,22981,22981.0 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--- a/test-data/calibrator.input.sampling.csv Fri Nov 22 11:37:19 2024 +0000 +++ b/test-data/calibrator.input.sampling.csv Tue Dec 17 13:41:05 2024 +0000 @@ -1,343 +1,343 @@ -Unnamed: 0,Mg-glutamate,K-glutamate,Spermidine,3-PGA,NTP,HEPES,Amino acid,DNA 1,DNA 2,PEG-8000 -0,105.04000000000002,350.0,52.52000000000001,168.78,100.96,262.5,1094.0,239.478,1485.0,524.8000000000001 -1,131.3,350.0,78.78,225.04,75.72,262.5,875.2,239.478,1232.55,524.8000000000001 -2,52.52000000000001,210.0,131.3,112.52,50.48,262.5,1094.0,239.478,1485.0,524.8000000000001 -3,105.04000000000002,280.0,105.04000000000002,225.04,50.48,262.5,1094.0,960.78,1485.0,524.8000000000001 -4,105.04000000000002,210.0,105.04000000000002,281.3,126.2,262.5,1094.0,717.0,994.95,262.40000000000003 -5,52.52000000000001,350.0,131.3,168.78,50.48,262.5,875.2,473.22,1232.55,262.40000000000003 -6,105.04000000000002,350.0,105.04000000000002,168.78,75.72,262.5,1094.0,717.0,994.95,0.0 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--- a/test-data/calibrator.input.sampling.tsv Fri Nov 22 11:37:19 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,343 +0,0 @@ - Mg-glutamate K-glutamate Spermidine 3-PGA NTP HEPES Amino acid DNA 1 DNA 2 PEG-8000 -0 105.04000000000002 350.0 52.52000000000001 168.78 100.96 262.5 1094.0 239.478 1485.0 524.8000000000001 -1 131.3 350.0 78.78 225.04 75.72 262.5 875.2 239.478 1232.55 524.8000000000001 -2 52.52000000000001 210.0 131.3 112.52 50.48 262.5 1094.0 239.478 1485.0 524.8000000000001 -3 105.04000000000002 280.0 105.04000000000002 225.04 50.48 262.5 1094.0 960.78 1485.0 524.8000000000001 -4 105.04000000000002 210.0 105.04000000000002 281.3 126.2 262.5 1094.0 717.0 994.95 262.40000000000003 -5 52.52000000000001 350.0 131.3 168.78 50.48 262.5 875.2 473.22 1232.55 262.40000000000003 -6 105.04000000000002 350.0 105.04000000000002 168.78 75.72 262.5 1094.0 717.0 994.95 0.0 -7 52.52000000000001 280.0 105.04000000000002 225.04 100.96 262.5 875.2 473.22 1232.55 1049.6 -8 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