Mercurial > repos > tduigou > neo4jsbml
comparison neo4jsbml.xml @ 1:baf9eed5353b draft
planemo upload for repository https://github.com/brsynth/neo4jsbml commit 513db7f056db275f3f5d8d1337d39ff66012d89f
author | tduigou |
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date | Mon, 09 Oct 2023 10:48:58 +0000 |
parents | 748d0a0925cb |
children | 0dbe53bc9519 |
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0:748d0a0925cb | 1:baf9eed5353b |
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6 <requirements> | 6 <requirements> |
7 <requirement type="package" version="@TOOL_VERSION@">neo4jsbml</requirement> | 7 <requirement type="package" version="@TOOL_VERSION@">neo4jsbml</requirement> |
8 </requirements> | 8 </requirements> |
9 <command detect_errors="exit_code"><![CDATA[ | 9 <command detect_errors="exit_code"><![CDATA[ |
10 python -m neo4jsbml | 10 python -m neo4jsbml |
11 --input-auradb-file '$input_auradb_file' | 11 --input-auradb-file '$input_auradb_file' |
12 | 12 --input-file-sbml '$input_file_sbml' |
13 --input-file-sbml '$input_file_sbml' | 13 --input-modelisation-json '$input_modelisation_json' |
14 #if str($input_tag_str) != "" | |
15 --input-tag-str '$input_tag_str' | |
16 #end if | |
17 --input-modelisation-json '$input_modelisation_json' > '$output_log' | |
18 ]]></command> | 14 ]]></command> |
19 <inputs> | 15 <inputs> |
20 <param name="input_auradb_file" type="data" format="txt" label="Config file provided by AuraDB"/> | 16 <param name="input_auradb_file" type="data" format="txt" label="Config file provided by AuraDB"/> |
21 <param name="input_file_sbml" type="data" format="sbml" label="SBML model"/> | 17 <param name="input_file_sbml" type="data" format="sbml" label="SBML model"/> |
22 <param name="input_tag_str" type="text" label="Identifier of the model"/> | 18 <param name="input_tag_str" type="text" label="Identifier of the model"/> |