# HG changeset patch
# User tduigou
# Date 1760537116 0
# Node ID 57decad62d54188abe6d8bffd33619a47fb34d74
# Parent  5ff2b0c02dd61d22eec412609e4a8b6b32aadf7d
planemo upload for repository https://github.com/brsynth/rp2paths commit 04bc931a627d3b81dc70536f6bfe5aecf58e5990-dirty

diff -r 5ff2b0c02dd6 -r 57decad62d54 rp2paths.xml
--- a/rp2paths.xml	Mon Oct 06 10:08:25 2025 +0000
+++ b/rp2paths.xml	Wed Oct 15 14:05:16 2025 +0000
@@ -2,7 +2,7 @@
     license="MIT">
     <description>Enumerate and seperate the different pathways generated by RetroPath2.0</description>
     <macros>
-        <token name="@VERSION_SUFFIX@">1</token>
+        <token name="@VERSION_SUFFIX@">2</token>
         <token name="@TOOL_VERSION@">2.1.0</token>
     </macros>
     <requirements>
@@ -69,7 +69,7 @@
         </section>
         <section name="cofactor_removal" title="Cofactor removal" expanded="False">
             <param name="cofile"
-                type="data" format="csv" optional="True" label="List of cofactors" />
+                type="data" format="csv,tsv,tabular,txt" optional="True" label="List of cofactors" />
         </section>
         <section name="scope" title="Scope" expanded="False">
             <param
@@ -84,10 +84,10 @@
             <param name="timeout" type="integer" value="1800" label="Time Out"
                 help="Time out before killing a process (in seconds), default: 30 minutes." />
             <param
-                name="maxsteps" type="integer" min="0" value="0" max="20" label="Max steps"
+                name="maxsteps" type="integer" min="0" value="0" label="Max steps"
                 help="Cutoff on the maximum number of steps in a pathways. 0 (default) for unlimited number of steps" />
             <param
-                name="maxpaths" type="integer" min="0" value="0" max="20" label="Max pathways"
+                name="maxpaths" type="integer" min="0" value="0" label="Max pathways"
                 help="Cutoff on the maximum number of pathways. 0 (default) for unlimited number of pathways" />
             <param
                 name="unfold" type="boolean" checked="false" label="Unfold pathways"