Mercurial > repos > tduigou > rptools_rpextractsink

comparison test-data/rp_002_0011.xml @ 0:b803ac9d24ab draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rptools commit 3bc34bfc82850daa2229724c396dcd9454039273-dirty
author tduigou
date Wed, 16 Nov 2022 11:12:36 +0000
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-1:000000000000 0:b803ac9d24ab
1 <?xml version="1.0" encoding="UTF-8"?>
2 <sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" level="3" version="1" groups:required="false" fbc:required="false">
3 <model metaid="b8c1523a13bf5120b604ab91344086ae4f6519e7153eba9eeacb319187964033" id="RP_model_002_0011" name="002_0011" substanceUnits="mole" timeUnits="second" extentUnits="mole" fbc:strict="true">
4 <listOfCompartments>
5 <compartment metaid="_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6" sboTerm="SBO:0000290" id="c" name="cytosol" size="1" constant="true">
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10 <rdf:Bag>
11 <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c"/>
12 <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c_c"/>
13 <rdf:li rdf:resource="http://identifiers.org/metanetx.compartment/MNXC3"/>
14 <rdf:li rdf:resource="http://identifiers.org/seed/c"/>
15 <rdf:li rdf:resource="http://identifiers.org/seed/c0"/>
16 <rdf:li rdf:resource="http://identifiers.org/seed/cytosol"/>
17 <rdf:li rdf:resource="http://identifiers.org/name/cytosol"/>
18 </rdf:Bag>
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21 </rdf:RDF>
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249 </species>
250 </listOfSpecies>
251 <listOfParameters>
252 <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_10000_0" value="10000" constant="true"/>
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278 </brsynth:tmpl_rxn_ids>
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281 <brsynth:selenzy/>
282 <brsynth:fba_biomass>
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292 <brsynth:error value="4.6679220722885155"/>
293 <brsynth:units value="kilojoule / mole"/>
294 </brsynth:thermo_dG0_prime>
295 <brsynth:thermo_dGm_prime>
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297 <brsynth:error value="4.6679220722885155"/>
298 <brsynth:units value="kilojoule / mole"/>
299 </brsynth:thermo_dGm_prime>
300 <brsynth:thermo_dG_prime>
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302 <brsynth:error value="4.6679220722885155"/>
303 <brsynth:units value="kilojoule / mole"/>
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305 <brsynth:thermo_dG>
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307 <brsynth:error value="4.6679220722885155"/>
308 <brsynth:units value="kilojoule / mole"/>
309 </brsynth:thermo_dG>
310 </brsynth:brsynth>
311 </rdf:BRSynth>
312 </rdf:RDF>
313 </annotation>
314 <listOfReactants>
315 <speciesReference species="MNXM100" stoichiometry="1" constant="true"/>
316 <speciesReference species="MNXM83" stoichiometry="1" constant="true"/>
317 </listOfReactants>
318 <listOfProducts>
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322 </reaction>
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380 </brsynth:brsynth>
381 </rdf:BRSynth>
382 </rdf:RDF>
383 </annotation>
384 <listOfReactants>
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386 </listOfReactants>
387 <listOfProducts>
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450 </listOfReactants>
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453 <speciesReference species="TARGET_0000000001" stoichiometry="1" constant="true"/>
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585 </groups:group>
586 </groups:listOfGroups>
587 </model>
588 </sbml>