Mercurial > repos > tduigou > rptools_rpfba

comparison rpfba.xml @ 3:b62127088cfe draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rptools commit 044274b46d50a1d0e3708e80e0dfecf1de653c65
author tduigou
date Thu, 02 Nov 2023 14:35:58 +0000
parents 082cd90e7254
children f297590100c8
comparison
equal deleted inserted replaced
2:082cd90e7254 3:b62127088cfe
72 <is_valid_xml /> 72 <is_valid_xml />
73 <!--check fba_fraction value--> 73 <!--check fba_fraction value-->
74 <has_text text="5.54302" /> 74 <has_text text="5.54302" />
75 <!--check fba_biomass value--> 75 <!--check fba_biomass value-->
76 <has_text text="1.31359" /> 76 <has_text text="1.31359" />
77 <has_n_lines n="408" /> 77 <has_n_lines n="396" />
78 </assert_contents> 78 </assert_contents>
79 </output> 79 </output>
80 </test> 80 </test>
81 <test> 81 <test>
82 <!-- test 2: check if identical outputs are produced with R_BIOMASS__3 biomass name ID and BiGG model (iCN718) and sim_type=fba--> 82 <!-- test 2: check if identical outputs are produced with R_BIOMASS__3 biomass name ID and BiGG model (iCN718) and sim_type=fba-->
90 <assert_contents> 90 <assert_contents>
91 <is_valid_xml /> 91 <is_valid_xml />
92 <!--check fba_fba value--> 92 <!--check fba_fba value-->
93 <has_text text="16.47058" /> 93 <has_text text="16.47058" />
94 <not_has_text text="fba_fraction" /> 94 <not_has_text text="fba_fraction" />
95 <has_n_lines n="392" /> 95 <has_n_lines n="380" />
96 </assert_contents> 96 </assert_contents>
97 </output> 97 </output>
98 </test> 98 </test>
99 <test> 99 <test>
100 <!-- test 3: check if identical outputs are produced with R_DM_biomass_c biomass name ID and BiGG model (iCN718) and sim_type=pfba--> 100 <!-- test 3: check if identical outputs are produced with R_DM_biomass_c biomass name ID and BiGG model (iCN718) and sim_type=pfba-->
108 <assert_contents> 108 <assert_contents>
109 <is_valid_xml /> 109 <is_valid_xml />
110 <!--check fba_pfba value--> 110 <!--check fba_pfba value-->
111 <has_text text="2623.54248" /> 111 <has_text text="2623.54248" />
112 <not_has_text text="fba_fraction" /> 112 <not_has_text text="fba_fraction" />
113 <has_n_lines n="392" /> 113 <has_n_lines n="380" />
114 </assert_contents> 114 </assert_contents>
115 </output> 115 </output>
116 </test> 116 </test>
117 </tests> 117 </tests>
118 <help><![CDATA[ 118 <help><![CDATA[