Mercurial > repos > tduigou > rptools_rpfba
diff rpfba.xml @ 1:5d35eea4f75d draft
planemo upload commit 3bc34bfc82850daa2229724c396dcd9454039273-dirty
| author | tduigou |
|---|---|
| date | Wed, 16 Nov 2022 14:58:22 +0000 |
| parents | 21349603013a |
| children | 082cd90e7254 |
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--- a/rpfba.xml Wed Nov 16 11:13:10 2022 +0000 +++ b/rpfba.xml Wed Nov 16 14:58:22 2022 +0000 @@ -67,7 +67,7 @@ <tests> <test> <!-- test 1: check if identical outputs are produced with R_BIOMASS__3 biomass name ID and BiGG model (iCN718) --> - <param name="pathway" value="rp_001_0001.xml" /> + <param name="pathway" value="rp_001_0001_rpfba_in.xml" /> <param name="model" value="iCN718.xml.gz" /> <param name="biomass_rxn_id" value="R_BIOMASS__3" /> <output name="pathway_with_fba" > @@ -83,7 +83,7 @@ </test> <test> <!-- test 2: check if identical outputs are produced with R_BIOMASS__3 biomass name ID and BiGG model (iCN718) and sim_type=fba--> - <param name="pathway" value="rp_001_0001.xml" /> + <param name="pathway" value="rp_001_0001_rpfba_in.xml" /> <param name="model" value="iCN718.xml.gz" /> <param name="biomass_rxn_id" value="R_BIOMASS__3" /> <conditional name="input_sim_type"> @@ -101,7 +101,7 @@ </test> <test> <!-- test 3: check if identical outputs are produced with R_DM_biomass_c biomass name ID and BiGG model (iCN718) and sim_type=pfba--> - <param name="pathway" value="rp_001_0001.xml" /> + <param name="pathway" value="rp_001_0001_rpfba_in.xml" /> <param name="model" value="iCN718.xml.gz" /> <param name="biomass_rxn_id" value="R_DM_biomass_c" /> <conditional name="input_sim_type">