Mercurial > repos > tduigou > rptools_rpviz
comparison test-data/scored_pathway.xml @ 3:9588a5b84518 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rptools commit 044274b46d50a1d0e3708e80e0dfecf1de653c65
author | tduigou |
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date | Thu, 02 Nov 2023 14:37:19 +0000 |
parents | 751dfcc6f663 |
children | b98c2718a620 |
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2:751dfcc6f663 | 3:9588a5b84518 |
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6 <annotation> | 6 <annotation> |
7 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 7 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
8 <rdf:Description rdf:about="#_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6"> | 8 <rdf:Description rdf:about="#_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6"> |
9 <bqbiol:is> | 9 <bqbiol:is> |
10 <rdf:Bag> | 10 <rdf:Bag> |
11 <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c"/> | |
12 <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c_c"/> | |
13 <rdf:li rdf:resource="http://identifiers.org/metanetx.compartment/MNXC3"/> | |
14 <rdf:li rdf:resource="http://identifiers.org/seed/c"/> | 11 <rdf:li rdf:resource="http://identifiers.org/seed/c"/> |
15 <rdf:li rdf:resource="http://identifiers.org/seed/c0"/> | 12 <rdf:li rdf:resource="http://identifiers.org/seed/c0"/> |
16 <rdf:li rdf:resource="http://identifiers.org/seed/cytosol"/> | 13 <rdf:li rdf:resource="http://identifiers.org/seed/cytosol"/> |
17 <rdf:li rdf:resource="http://identifiers.org/name/cytosol"/> | |
18 </rdf:Bag> | 14 </rdf:Bag> |
19 </bqbiol:is> | 15 </bqbiol:is> |
20 </rdf:Description> | 16 </rdf:Description> |
21 </rdf:RDF> | 17 </rdf:RDF> |
22 </annotation> | 18 </annotation> |
23 </compartment> | 19 </compartment> |
24 </listOfCompartments> | 20 </listOfCompartments> |
25 <listOfSpecies> | 21 <listOfSpecies> |
22 <species metaid="_2a301e4e848a79652a3993832c9d968953ade64ccc71ea0ef1c47184f60ec251" id="MNXM13" name="MNXM13" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
23 <annotation> | |
24 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
25 <rdf:Description rdf:about="#_2a301e4e848a79652a3993832c9d968953ade64ccc71ea0ef1c47184f60ec251"> | |
26 <bqbiol:is> | |
27 <rdf:Bag/> | |
28 </bqbiol:is> | |
29 </rdf:Description> | |
30 <rdf:BRSynth rdf:about="#_2a301e4e848a79652a3993832c9d968953ade64ccc71ea0ef1c47184f60ec251"> | |
31 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
32 <brsynth:smiles value="O=C=O"/> | |
33 <brsynth:inchi value="InChI=1S/CO2/c2-1-3"/> | |
34 <brsynth:inchikey value="CURLTUGMZLYLDI-UHFFFAOYSA-N"/> | |
35 </brsynth:brsynth> | |
36 </rdf:BRSynth> | |
37 </rdf:RDF> | |
38 </annotation> | |
39 </species> | |
40 <species metaid="_7d22781170c09f66099e3d92f82fe456ce2c3f02d9162656e7ca49a0cc9c7b16" id="CMPD_0000000002" name="CMPD_0000000002" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
41 <annotation> | |
42 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
43 <rdf:Description rdf:about="#_7d22781170c09f66099e3d92f82fe456ce2c3f02d9162656e7ca49a0cc9c7b16"> | |
44 <bqbiol:is> | |
45 <rdf:Bag/> | |
46 </bqbiol:is> | |
47 </rdf:Description> | |
48 <rdf:BRSynth rdf:about="#_7d22781170c09f66099e3d92f82fe456ce2c3f02d9162656e7ca49a0cc9c7b16"> | |
49 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
50 <brsynth:smiles value="[H]OC(=O)C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H]"/> | |
51 <brsynth:inchi value="InChI=1S/C9H8O2/c10-9(11)7-6-8-4-2-1-3-5-8/h1-7H,(H,10,11)"/> | |
52 <brsynth:inchikey value="WBYWAXJHAXSJNI-UHFFFAOYSA-N"/> | |
53 </brsynth:brsynth> | |
54 </rdf:BRSynth> | |
55 </rdf:RDF> | |
56 </annotation> | |
57 </species> | |
58 <species metaid="_70815415d0cc5bdb32d594ff385cc7e2e02e73da1f5099a321b65aa158a4cf7b" id="MNXM15" name="MNXM15" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
59 <annotation> | |
60 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
61 <rdf:Description rdf:about="#_70815415d0cc5bdb32d594ff385cc7e2e02e73da1f5099a321b65aa158a4cf7b"> | |
62 <bqbiol:is> | |
63 <rdf:Bag/> | |
64 </bqbiol:is> | |
65 </rdf:Description> | |
66 <rdf:BRSynth rdf:about="#_70815415d0cc5bdb32d594ff385cc7e2e02e73da1f5099a321b65aa158a4cf7b"> | |
67 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
68 <brsynth:smiles value="N"/> | |
69 <brsynth:inchi value="InChI=1S/H3N/h1H3"/> | |
70 <brsynth:inchikey value="QGZKDVFQNNGYKY-UHFFFAOYSA-N"/> | |
71 </brsynth:brsynth> | |
72 </rdf:BRSynth> | |
73 </rdf:RDF> | |
74 </annotation> | |
75 </species> | |
26 <species metaid="fc3a2e5cd1a81a37f4065ad4b53b9e5009ace624c22100af7e69653ca4a2eae9" id="MNXM97" name="MNXM97" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | 76 <species metaid="fc3a2e5cd1a81a37f4065ad4b53b9e5009ace624c22100af7e69653ca4a2eae9" id="MNXM97" name="MNXM97" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
27 <annotation> | 77 <annotation> |
28 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 78 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
29 <rdf:Description rdf:about="#fc3a2e5cd1a81a37f4065ad4b53b9e5009ace624c22100af7e69653ca4a2eae9"> | 79 <rdf:Description rdf:about="#fc3a2e5cd1a81a37f4065ad4b53b9e5009ace624c22100af7e69653ca4a2eae9"> |
30 <bqbiol:is> | 80 <bqbiol:is> |
39 </brsynth:brsynth> | 89 </brsynth:brsynth> |
40 </rdf:BRSynth> | 90 </rdf:BRSynth> |
41 </rdf:RDF> | 91 </rdf:RDF> |
42 </annotation> | 92 </annotation> |
43 </species> | 93 </species> |
44 <species metaid="_7d22781170c09f66099e3d92f82fe456ce2c3f02d9162656e7ca49a0cc9c7b16" id="CMPD_0000000002" name="CMPD_0000000002" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
45 <annotation> | |
46 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
47 <rdf:Description rdf:about="#_7d22781170c09f66099e3d92f82fe456ce2c3f02d9162656e7ca49a0cc9c7b16"> | |
48 <bqbiol:is> | |
49 <rdf:Bag/> | |
50 </bqbiol:is> | |
51 </rdf:Description> | |
52 <rdf:BRSynth rdf:about="#_7d22781170c09f66099e3d92f82fe456ce2c3f02d9162656e7ca49a0cc9c7b16"> | |
53 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
54 <brsynth:smiles value="[H]OC(=O)C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H]"/> | |
55 <brsynth:inchi value="InChI=1S/C9H8O2/c10-9(11)7-6-8-4-2-1-3-5-8/h1-7H,(H,10,11)"/> | |
56 <brsynth:inchikey value="WBYWAXJHAXSJNI-UHFFFAOYSA-N"/> | |
57 </brsynth:brsynth> | |
58 </rdf:BRSynth> | |
59 </rdf:RDF> | |
60 </annotation> | |
61 </species> | |
62 <species metaid="_2a301e4e848a79652a3993832c9d968953ade64ccc71ea0ef1c47184f60ec251" id="MNXM13" name="MNXM13" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
63 <annotation> | |
64 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
65 <rdf:Description rdf:about="#_2a301e4e848a79652a3993832c9d968953ade64ccc71ea0ef1c47184f60ec251"> | |
66 <bqbiol:is> | |
67 <rdf:Bag/> | |
68 </bqbiol:is> | |
69 </rdf:Description> | |
70 <rdf:BRSynth rdf:about="#_2a301e4e848a79652a3993832c9d968953ade64ccc71ea0ef1c47184f60ec251"> | |
71 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
72 <brsynth:smiles value="O=C=O"/> | |
73 <brsynth:inchi value="InChI=1S/CO2/c2-1-3"/> | |
74 <brsynth:inchikey value="CURLTUGMZLYLDI-UHFFFAOYSA-N"/> | |
75 </brsynth:brsynth> | |
76 </rdf:BRSynth> | |
77 </rdf:RDF> | |
78 </annotation> | |
79 </species> | |
80 <species metaid="ada4d198af79d26a0eb691008fc79b883e3ee4d3ef8ce39c18214444cc981f25" id="MNXM1" name="MNXM1" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | 94 <species metaid="ada4d198af79d26a0eb691008fc79b883e3ee4d3ef8ce39c18214444cc981f25" id="MNXM1" name="MNXM1" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
81 <annotation> | 95 <annotation> |
82 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 96 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
83 <rdf:Description rdf:about="#ada4d198af79d26a0eb691008fc79b883e3ee4d3ef8ce39c18214444cc981f25"> | 97 <rdf:Description rdf:about="#ada4d198af79d26a0eb691008fc79b883e3ee4d3ef8ce39c18214444cc981f25"> |
84 <bqbiol:is> | 98 <bqbiol:is> |
106 <rdf:BRSynth rdf:about="#_6817bb5f7133f50744b232330f1f3009343f785b8f77602ce5f44cdd9458f002"> | 120 <rdf:BRSynth rdf:about="#_6817bb5f7133f50744b232330f1f3009343f785b8f77602ce5f44cdd9458f002"> |
107 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | 121 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
108 <brsynth:smiles value="[H]C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H]"/> | 122 <brsynth:smiles value="[H]C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H]"/> |
109 <brsynth:inchi value="InChI=1S/C8H8/c1-2-8-6-4-3-5-7-8/h2-7H,1H2"/> | 123 <brsynth:inchi value="InChI=1S/C8H8/c1-2-8-6-4-3-5-7-8/h2-7H,1H2"/> |
110 <brsynth:inchikey value="PPBRXRYQALVLMV-UHFFFAOYSA-N"/> | 124 <brsynth:inchikey value="PPBRXRYQALVLMV-UHFFFAOYSA-N"/> |
111 </brsynth:brsynth> | |
112 </rdf:BRSynth> | |
113 </rdf:RDF> | |
114 </annotation> | |
115 </species> | |
116 <species metaid="_70815415d0cc5bdb32d594ff385cc7e2e02e73da1f5099a321b65aa158a4cf7b" id="MNXM15" name="MNXM15" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
117 <annotation> | |
118 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
119 <rdf:Description rdf:about="#_70815415d0cc5bdb32d594ff385cc7e2e02e73da1f5099a321b65aa158a4cf7b"> | |
120 <bqbiol:is> | |
121 <rdf:Bag/> | |
122 </bqbiol:is> | |
123 </rdf:Description> | |
124 <rdf:BRSynth rdf:about="#_70815415d0cc5bdb32d594ff385cc7e2e02e73da1f5099a321b65aa158a4cf7b"> | |
125 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
126 <brsynth:smiles value="N"/> | |
127 <brsynth:inchi value="InChI=1S/H3N/h1H3"/> | |
128 <brsynth:inchikey value="QGZKDVFQNNGYKY-UHFFFAOYSA-N"/> | |
129 </brsynth:brsynth> | 125 </brsynth:brsynth> |
130 </rdf:BRSynth> | 126 </rdf:BRSynth> |
131 </rdf:RDF> | 127 </rdf:RDF> |
132 </annotation> | 128 </annotation> |
133 </species> | 129 </species> |
140 <reaction metaid="_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4" sboTerm="SBO:0000176" id="rxn_1" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> | 136 <reaction metaid="_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4" sboTerm="SBO:0000176" id="rxn_1" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> |
141 <annotation> | 137 <annotation> |
142 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 138 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
143 <rdf:Description rdf:about="#_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4"> | 139 <rdf:Description rdf:about="#_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4"> |
144 <bqbiol:is> | 140 <bqbiol:is> |
145 <rdf:Bag> | 141 <rdf:Bag/> |
146 <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.24"/> | |
147 <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.25"/> | |
148 </rdf:Bag> | |
149 </bqbiol:is> | 142 </bqbiol:is> |
150 </rdf:Description> | 143 </rdf:Description> |
151 <rdf:BRSynth rdf:about="#_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4"> | 144 <rdf:BRSynth rdf:about="#_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4"> |
152 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | 145 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
153 <brsynth:smiles value="[H]OC(=O)C([H])(N([H])[H])C([H])([H])c1c([H])c([H])c([H])c([H])c1[H]>>[H]OC(=O)C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H].N"/> | 146 <brsynth:smiles value="[H]OC(=O)C([H])(N([H])[H])C([H])([H])c1c([H])c([H])c([H])c([H])c1[H]>>[H]OC(=O)C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H].N"/> |
202 <reaction metaid="c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff" sboTerm="SBO:0000176" id="rxn_2" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> | 195 <reaction metaid="c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff" sboTerm="SBO:0000176" id="rxn_2" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> |
203 <annotation> | 196 <annotation> |
204 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 197 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
205 <rdf:Description rdf:about="#c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff"> | 198 <rdf:Description rdf:about="#c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff"> |
206 <bqbiol:is> | 199 <bqbiol:is> |
207 <rdf:Bag> | 200 <rdf:Bag/> |
208 <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.102"/> | |
209 </rdf:Bag> | |
210 </bqbiol:is> | 201 </bqbiol:is> |
211 </rdf:Description> | 202 </rdf:Description> |
212 <rdf:BRSynth rdf:about="#c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff"> | 203 <rdf:BRSynth rdf:about="#c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff"> |
213 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | 204 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
214 <brsynth:smiles value="[H]OC(=O)C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H].[H+]>>O=C=O.[H]C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H]"/> | 205 <brsynth:smiles value="[H]OC(=O)C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H].[H+]>>O=C=O.[H]C([H])=C([H])c1c([H])c([H])c([H])c([H])c1[H]"/> |
324 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | 315 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
325 </rdf:BRSynth> | 316 </rdf:BRSynth> |
326 </rdf:RDF> | 317 </rdf:RDF> |
327 </annotation> | 318 </annotation> |
328 <groups:listOfMembers> | 319 <groups:listOfMembers> |
320 <groups:member groups:idRef="CMPD_0000000002"/> | |
321 <groups:member groups:idRef="MNXM97"/> | |
329 <groups:member groups:idRef="TARGET_0000000001"/> | 322 <groups:member groups:idRef="TARGET_0000000001"/> |
330 <groups:member groups:idRef="MNXM97"/> | |
331 <groups:member groups:idRef="CMPD_0000000002"/> | |
332 </groups:listOfMembers> | 323 </groups:listOfMembers> |
333 </groups:group> | 324 </groups:group> |
334 <groups:group metaid="_9e3154173c97366b3980dd1642e1e35d0bdfc3274abc744e89ecb518bcd48378" groups:id="rp_completed_species" groups:kind="collection"> | 325 <groups:group metaid="_9e3154173c97366b3980dd1642e1e35d0bdfc3274abc744e89ecb518bcd48378" groups:id="rp_completed_species" groups:kind="collection"> |
335 <annotation> | 326 <annotation> |
336 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 327 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
339 </rdf:BRSynth> | 330 </rdf:BRSynth> |
340 </rdf:RDF> | 331 </rdf:RDF> |
341 </annotation> | 332 </annotation> |
342 <groups:listOfMembers> | 333 <groups:listOfMembers> |
343 <groups:member groups:idRef="MNXM13"/> | 334 <groups:member groups:idRef="MNXM13"/> |
335 <groups:member groups:idRef="MNXM15"/> | |
344 <groups:member groups:idRef="MNXM1"/> | 336 <groups:member groups:idRef="MNXM1"/> |
337 </groups:listOfMembers> | |
338 </groups:group> | |
339 <groups:group metaid="_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3" groups:id="rp_sink_species" groups:kind="collection"> | |
340 <annotation> | |
341 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
342 <rdf:BRSynth rdf:about="#_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3"> | |
343 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | |
344 </rdf:BRSynth> | |
345 </rdf:RDF> | |
346 </annotation> | |
347 <groups:listOfMembers> | |
348 <groups:member groups:idRef="MNXM13"/> | |
345 <groups:member groups:idRef="MNXM15"/> | 349 <groups:member groups:idRef="MNXM15"/> |
346 </groups:listOfMembers> | |
347 </groups:group> | |
348 <groups:group metaid="_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3" groups:id="rp_sink_species" groups:kind="collection"> | |
349 <annotation> | |
350 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
351 <rdf:BRSynth rdf:about="#_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3"> | |
352 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | |
353 </rdf:BRSynth> | |
354 </rdf:RDF> | |
355 </annotation> | |
356 <groups:listOfMembers> | |
357 <groups:member groups:idRef="MNXM13"/> | |
358 <groups:member groups:idRef="MNXM1"/> | 350 <groups:member groups:idRef="MNXM1"/> |
359 <groups:member groups:idRef="MNXM15"/> | |
360 <groups:member groups:idRef="MNXM97"/> | 351 <groups:member groups:idRef="MNXM97"/> |
361 </groups:listOfMembers> | 352 </groups:listOfMembers> |
362 </groups:group> | 353 </groups:group> |
363 <groups:group metaid="a0f48a6fe4f833a3d15abd7ee5b944b97d629570ac09588e9fb6fdf6196ab189" groups:id="rp_fba_ignored_species" groups:kind="collection"> | 354 <groups:group metaid="a0f48a6fe4f833a3d15abd7ee5b944b97d629570ac09588e9fb6fdf6196ab189" groups:id="rp_fba_ignored_species" groups:kind="collection"> |
364 <annotation> | 355 <annotation> |