Mercurial > repos > tduigou > sbol3_diff
diff test-data/simple_library.nt @ 0:024def08af09 draft
planemo upload commit ce400589f51221295c59294ed462bb82220f4654-dirty
author | tduigou |
---|---|
date | Mon, 19 Dec 2022 10:13:08 +0000 |
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children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/simple_library.nt Mon Dec 19 10:13:08 2022 +0000 @@ -0,0 +1,681 @@ +<http://parts.igem.org/E0040> <http://sbols.org/v3#description> "Green FP (off patent)\nGFPmut3" . +<http://parts.igem.org/E0040> <http://sbols.org/v3#displayId> "E0040" . +<http://parts.igem.org/E0040> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/E0040> <http://sbols.org/v3#hasSequence> <http://parts.igem.org/E0040_sequence> . +<http://parts.igem.org/E0040> <http://sbols.org/v3#name> "GFPmut3" . +<http://parts.igem.org/E0040> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000316> . +<http://parts.igem.org/E0040> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://parts.igem.org/E0040> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<http://parts.igem.org/E0040_sequence> <http://sbols.org/v3#displayId> "E0040_sequence" . 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<http://parts.igem.org> . +<http://parts.igem.org/E0040_sequence> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Sequence> . +<http://parts.igem.org/E1010> <http://sbols.org/v3#description> "Red FP (off patent)\nmRFP1" . +<http://parts.igem.org/E1010> <http://sbols.org/v3#displayId> "E1010" . +<http://parts.igem.org/E1010> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/E1010> <http://sbols.org/v3#hasSequence> <http://parts.igem.org/E1010_sequence> . +<http://parts.igem.org/E1010> <http://sbols.org/v3#name> "mRFP1" . +<http://parts.igem.org/E1010> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000316> . +<http://parts.igem.org/E1010> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://parts.igem.org/E1010> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<http://parts.igem.org/E1010_sequence> <http://sbols.org/v3#displayId> "E1010_sequence" . 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<http://parts.igem.org/J23105_sequence> . +<http://parts.igem.org/J23105> <http://sbols.org/v3#name> "J23105" . +<http://parts.igem.org/J23105> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000167> . +<http://parts.igem.org/J23105> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://parts.igem.org/J23105> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<http://parts.igem.org/J23105_sequence> <http://sbols.org/v3#displayId> "J23105_sequence" . +<http://parts.igem.org/J23105_sequence> <http://sbols.org/v3#elements> "TTGACAGCTAGCTCAGTCCTAGGGACTATGCTAGC" . +<http://parts.igem.org/J23105_sequence> <http://sbols.org/v3#encoding> <https://identifiers.org/edam:format_1207> . +<http://parts.igem.org/J23105_sequence> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/J23105_sequence> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Sequence> . +<http://parts.igem.org/J364001> <http://sbols.org/v3#description> "J23106 2018 interlab" . +<http://parts.igem.org/J364001> <http://sbols.org/v3#displayId> "J364001" . +<http://parts.igem.org/J364001> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/J364001> <http://sbols.org/v3#hasSequence> <http://parts.igem.org/J364001_sequence> . +<http://parts.igem.org/J364001> <http://sbols.org/v3#name> "J364001" . +<http://parts.igem.org/J364001> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000804> . +<http://parts.igem.org/J364001> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://parts.igem.org/J364001> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<http://parts.igem.org/J364001_sequence> <http://sbols.org/v3#displayId> "J364001_sequence" . +<http://parts.igem.org/J364001_sequence> <http://sbols.org/v3#elements> "TTTACGGCTAGCTCAGTCCTAGGTATAGTGCTAGCTACTAGAGAAAGAGGAGAAATACTAGATGCGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGTGATGTTAATGGGCACAAATTTTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGAAAACTACCTGTTCCATGGCCAACACTTGTCACTACTTTCGGTTATGGTGTTCAATGCTTTGCGAGATACCCAGATCATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAAAGAACTATATTTTTCAAAGATGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAAGGTGATACCCTTGTTAATAGAATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTTGGACACAAATTGGAATACAACTATAACTCACACAATGTATACATCATGGCAGACAAACAAAAGAATGGAATCAAAGTTAACTTCAAAATTAGACACAACATTGAAGATGGAAGCGTTCAACTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTTCGAAAGATCCCAACGAAAAGAGAGACCACATGGTCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGGATGAACTATACAAATAATAATACTAGAGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCTACTAGAGTCACACTGGCTCACCTTCGGGTGGGCCTTTCTGCGTTTATA" . +<http://parts.igem.org/J364001_sequence> <http://sbols.org/v3#encoding> <https://identifiers.org/edam:format_1207> . +<http://parts.igem.org/J364001_sequence> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/J364001_sequence> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Sequence> . +<http://parts.igem.org/J364002> <http://sbols.org/v3#description> "J23117 2018 interlab" . +<http://parts.igem.org/J364002> <http://sbols.org/v3#displayId> "J364002" . +<http://parts.igem.org/J364002> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/J364002> <http://sbols.org/v3#hasSequence> <http://parts.igem.org/J364002_sequence> . +<http://parts.igem.org/J364002> <http://sbols.org/v3#name> "J364002" . +<http://parts.igem.org/J364002> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000804> . +<http://parts.igem.org/J364002> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://parts.igem.org/J364002> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<http://parts.igem.org/J364002_sequence> <http://sbols.org/v3#displayId> "J364002_sequence" . +<http://parts.igem.org/J364002_sequence> <http://sbols.org/v3#elements> "TTGACAGCTAGCTCAGTCCTAGGGATTGTGCTAGCTACTAGAGAAAGAGGAGAAATACTAGATGCGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGTGATGTTAATGGGCACAAATTTTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGAAAACTACCTGTTCCATGGCCAACACTTGTCACTACTTTCGGTTATGGTGTTCAATGCTTTGCGAGATACCCAGATCATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAAAGAACTATATTTTTCAAAGATGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAAGGTGATACCCTTGTTAATAGAATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTTGGACACAAATTGGAATACAACTATAACTCACACAATGTATACATCATGGCAGACAAACAAAAGAATGGAATCAAAGTTAACTTCAAAATTAGACACAACATTGAAGATGGAAGCGTTCAACTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTTCGAAAGATCCCAACGAAAAGAGAGACCACATGGTCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGGATGAACTATACAAATAATAATACTAGAGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCTACTAGAGTCACACTGGCTCACCTTCGGGTGGGCCTTTCTGCGTTTATA" . +<http://parts.igem.org/J364002_sequence> <http://sbols.org/v3#encoding> <https://identifiers.org/edam:format_1207> . +<http://parts.igem.org/J364002_sequence> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/J364002_sequence> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Sequence> . +<http://parts.igem.org/J364007> <http://sbols.org/v3#description> "J23100 2018 interlab" . +<http://parts.igem.org/J364007> <http://sbols.org/v3#displayId> "J364007" . +<http://parts.igem.org/J364007> <http://sbols.org/v3#hasNamespace> <http://parts.igem.org> . +<http://parts.igem.org/J364007> <http://sbols.org/v3#hasSequence> <http://parts.igem.org/J364007_sequence> . +<http://parts.igem.org/J364007> <http://sbols.org/v3#name> "J364007" . +<http://parts.igem.org/J364007> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000804> . +<http://parts.igem.org/J364007> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://parts.igem.org/J364007> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<http://parts.igem.org/J364007_sequence> <http://sbols.org/v3#displayId> "J364007_sequence" . +<http://parts.igem.org/J364007_sequence> <http://sbols.org/v3#elements> "TTGACGGCTAGCTCAGTCCTAGGTACAGTGCTAGCTACTAGAGAAAGAGGAGAAATACTAGATGCGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGTGATGTTAATGGGCACAAATTTTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGAAAACTACCTGTTCCATGGCCAACACTTGTCACTACTTTCGGTTATGGTGTTCAATGCTTTGCGAGATACCCAGATCATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAAAGAACTATATTTTTCAAAGATGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAAGGTGATACCCTTGTTAATAGAATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTTGGACACAAATTGGAATACAACTATAACTCACACAATGTATACATCATGGCAGACAAACAAAAGAATGGAATCAAAGTTAACTTCAAAATTAGACACAACATTGAAGATGGAAGCGTTCAACTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTTCGAAAGATCCCAACGAAAAGAGAGACCACATGGTCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGGATGAACTATACAAATAATAATACTAGAGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCTACTAGAGTCACACTGGCTCACCTTCGGGTGGGCCTTTCTGCGTTTATA" . +<http://parts.igem.org/J364007_sequence> <http://sbols.org/v3#encoding> 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"ATGGCTCTGCCTAAACAAATGAAACTGACTTATCACATGGAGGGTACTGTGAACGGTCATTTTTTTATCATCAAGGGCGAAGGAGGGGGAGAGCCGTATGAGGGTACTCATACGATCAAGTTACAGGTGGTAGAGGGAAGCCCGTTGCCCTTTTCACCGGATATTCTTTCCACCGTCTTCCAATACGGCAACCGCTGCTTCACTAAATACCCTCCCAACATCGTTGATTACTTCAAAAACTCCTGCTCGGGCGGCGGTTATACTTTTGGACGTAGCTTCCTTTATGAGGACGGAGCTGTCTGTACTGCTTCCGGTGACATTACGCTGAGCAGCGACAAATCATCCTTTGAGCACAAATCTAAATTTCTGGGAGTAAACTTTCCTGCCGATGGCCCGGTGATGAAAAAAGAAACCACTAATTGGGAGCCTTCATGTGAGAAAATGACACCCAACGGGATGACCTTAATCGGTGATGTGACGGAGTTCCTGTTGAAGAAGGACGGTAAGCGTTACAAGTGCCAATTCCACACATTCCACGACGCGAAGGAGAAAAGCCGCAATATGCCGATGCCCGATTTCCATTTCGTTCAGCACGAGATTGAACGTAAAGATTTGCCAGGACCAATGCAAACATGGCAGTTGACCGAGCACGCAGCAGCCTGTAAGAACTGTTTCACAGAG" . +<http://sbolstandard.org/testfiles/mmilCFP_sequence> <http://sbols.org/v3#encoding> <https://identifiers.org/edam:format_1207> . +<http://sbolstandard.org/testfiles/mmilCFP_sequence> <http://sbols.org/v3#hasNamespace> <http://sbolstandard.org/testfiles> . +<http://sbolstandard.org/testfiles/mmilCFP_sequence> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Sequence> . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#description> "pMB1 replicon, 100-300 copy" . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#displayId> "pSB1C3" . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#hasNamespace> <http://sbolstandard.org/testfiles> . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#name> "pSB1C3" . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000155> . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<http://sbolstandard.org/testfiles/pSB1C3> <http://sbols.org/v3#type> <https://identifiers.org/SO:0000988> . +<http://sbolstandard.org/testfiles/pSB1C3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://sbols.org/v3#description> "" . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://sbols.org/v3#displayId> "LmrA" . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://sbols.org/v3#hasNamespace> <https://synbiohub.programmingbiology.org/public/Eco1C1G1T1> . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://sbols.org/v3#name> "LmrA" . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA> <http://www.w3.org/ns/prov#wasDerivedFrom> <https://synbiohub.programmingbiology.org/public/Eco1C1G1T1/LmrA/1> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#description> "Cyan FP; codon optimized using IDT tool <https://www.idtdna.com/CodonOpt>\nmCerulean3" . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#displayId> "ATP07149_1" . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#hasNamespace> <https://www.ncbi.nlm.nih.gov/nuccore> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#hasSequence> <https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1_sequence> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#name> "mCerulean3" . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#role> <https://identifiers.org/SO:0000316> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://sbols.org/v3#type> <https://identifiers.org/SBO:0000251> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Component> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1_sequence> <http://sbols.org/v3#displayId> "ATP07149_1_sequence" . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1_sequence> <http://sbols.org/v3#elements> "ATGGTGTCGAAAGGTGAAGAACTTTTTACAGGTGTGGTCCCCATTTTAGTCGAATTAGATGGGGATGTGAATGGTCACAAATTCTCGGTGTCTGGGGAGGGTGAAGGTGACGCGACCTACGGGAAGTTGACTCTGAAATTCATTTGCACTACGGGGAAGTTACCAGTGCCCTGGCCCACTCTGGTTACAACACTGTCATGGGGCGTCCAATGTTTTGCTCGTTATCCTGACCACATGAAACAGCATGACTTCTTCAAGAGCGCAATGCCGGAAGGCTATGTCCAAGAGCGTACTATCTTTTTCAAAGACGATGGGAACTACAAAACACGCGCAGAAGTGAAGTTTGAGGGAGATACCCTGGTTAATCGCATTGAATTGAAAGGTATCGACTTCAAGGAGGATGGTAATATCCTGGGGCACAAATTGGAGTACAACGCTATCCACGGCAATGTTTACATTACGGCAGACAAACAGAAAAACGGAATTAAGGCCAATTTCGGACTTAACTGCAACATCGAAGATGGGTCGGTACAACTGGCAGACCACTATCAGCAAAATACGCCTATTGGTGACGGTCCTGTCCTGTTACCGGACAATCATTATCTTTCCACTCAGTCGAAACTGAGTAAAGATCCGAACGAGAAGCGCGATCACATGGTATTATTAGAGTTCGTCACAGCCGCAGGTATTACGTTAGGGATGGATGAGCTTTACAAG" . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1_sequence> <http://sbols.org/v3#encoding> <https://identifiers.org/edam:format_1207> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1_sequence> <http://sbols.org/v3#hasNamespace> <https://www.ncbi.nlm.nih.gov/nuccore> . +<https://www.ncbi.nlm.nih.gov/nuccore/ATP07149_1_sequence> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://sbols.org/v3#Sequence> .