view tool_dependencies.xml @ 58:177d0d97e93a draft

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author testtool
date Fri, 05 May 2017 10:39:38 -0400
parents 5a8520840894
children 26104507bd52
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<?xml version="1.0"?>
<tool_dependency>
    <package name="libcurl" version="7.35">
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    </package>
    <package name="R" version="3.2.1">
        <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
<package name="450kdependency" version="0.0.1">
        <install version="1.0">
          <actions>
              <action type="setup_r_environment">
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                  </repository>
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                    </repository>
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                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/biomaRt_2.32.0.tar.gz</package>
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                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/siggenes_1.50.0.tar.gz</package>
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                    <package>https://cran.r-project.org/src/contrib/codetools_0.2-15.tar.gz</package>
                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/illuminaio_0.18.0.tar.gz</package>
                    <package>https://cran.r-project.org/src/contrib/openssl_0.9.6.tar.gz</package>
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                    <package>ftp://164.41.45.6/pub/plan/R/src/contrib/beanplot_1.2.tar.gz</package>
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                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/multtest_2.32.0.tar.gz</package>
                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/GenomeInfoDb_1.12.0.tar.gz</package>
                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/IRanges_2.4.8.tar.gz</package>
                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/S4Vectors_0.8.11.tar.gz</package>
                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/zlibbioc_1.22.0.tar.gz</package>
                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/XVector_0.10.0.tar.gz</package>
                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.44.0.tar.gz</package>
                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/GenomicRanges_1.22.4.tar.gz</package>
                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/rtracklayer_1.36.0.tar.gz</package>
                    <package>http://bioc.ism.ac.jp/packages/3.3/bioc/src/contrib/minfi_1.18.6.tar.gz</package>
                    <package>https://mirrors.ustc.edu.cn/bioc/packages/3.3/bioc/src/contrib/bumphunter_1.12.0.tar.gz</package>
                  </action>
              </actions>
              </install>
              <readme>
              </readme>
              </package>
              </tool_dependency>
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