# HG changeset patch # User testtool # Date 1493979506 14400 # Node ID 4cef4da1d6bd44e5cc4747cc606c3256a8593cdf # Parent c2ab9f7176c1fabd35ef861290f19073142418d3 Uploaded diff -r c2ab9f7176c1 -r 4cef4da1d6bd tool_dependencies.xml --- a/tool_dependencies.xml Fri May 05 06:07:14 2017 -0400 +++ b/tool_dependencies.xml Fri May 05 06:18:26 2017 -0400 @@ -16,19 +16,19 @@ + http://bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.22.0.tar.gz + http://www.bioconductor.org/packages/release/bioc/src/contrib/S4Vectors_0.14.0.tar.gz + http://bioconductor.org/packages/release/bioc/src/contrib/IRanges_2.10.0.tar.gz + http://bioconductor.org/packages/release/bioc/src/contrib/zlibbioc_1.22.0.tar.gz https://cran.rstudio.com/src/contrib/locfit_1.5-9.1.tar.gz https://cran.r-project.org/src/contrib/iterators_1.0.8.tar.gz - https://mirrors.ustc.edu.cn/bioc/packages/3.2/bioc/src/contrib/XVector_0.10.0.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/GenomeInfoDb_1.12.0.tar.gz https://cran.r-project.org/src/contrib/lattice_0.20-35.tar.gz https://cran.r-project.org/src/contrib/foreach_1.4.3.tar.gz https://bioc.ism.ac.jp/packages/3.3/bioc/src/contrib/SummarizedExperiment_1.2.3.tar.gz - http://bioconductor.org/packages/release/bioc/src/contrib/IRanges_2.10.0.tar.gz http://www.bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.36.1.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.44.0.tar.gz https://bioconductor.riken.jp/packages/3.3/bioc/src/contrib/GenomicRanges_1.24.3.tar.gz - http://www.bioconductor.org/packages/release/bioc/src/contrib/S4Vectors_0.14.0.tar.gz - http://bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.22.0.tar.gz https://cran.rstudio.com/src/contrib/locfit_1.5-9.1.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/genefilter_1.58.0.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/GenomicFeatures_1.28.0.tar.gz @@ -47,7 +47,6 @@ https://cran.r-project.org/src/contrib/XML_3.98-1.7.tar.gz https://cran.r-project.org/src/contrib/RColorBrewer_1.1-2.tar.gz https://cran.rstudio.com/src/contrib/matrixStats_0.52.2.tar.gz - http://bioconductor.org/packages/release/bioc/src/contrib/zlibbioc_1.22.0.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/AnnotationDbi_1.38.0.tar.gz https://cran.r-project.org/src/contrib/xtable_1.8-2.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/annotate_1.54.0.tar.gz @@ -79,7 +78,9 @@ https://cran.r-project.org/src/contrib/reshape_0.8.6.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/multtest_2.32.0.tar.gz http://bioconductor.org/packages/release/bioc/src/contrib/rtracklayer_1.36.0.tar.gz + http://bioc.ism.ac.jp/packages/3.3/bioc/src/contrib/minfi_1.18.6.tar.gz https://mirrors.ustc.edu.cn/bioc/packages/3.3/bioc/src/contrib/bumphunter_1.12.0.tar.gz + https://mirrors.ustc.edu.cn/bioc/packages/3.2/bioc/src/contrib/XVector_0.10.0.tar.gz