Mercurial > repos > testtool > anno_peak_figure
view annoPeakFigure/annoPeakFigure.xml @ 1:6278004aa9b2 draft
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author | testtool |
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date | Tue, 28 Feb 2017 05:42:05 -0500 |
parents | 88964c4b12a0 |
children | 6bcf1f0bff41 |
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<tool id="APfigure" name="annoPeakFigure" version="1.16.2"> <requirements> <requirement type="package" version="3.2.1">R</requirement> </requirements> <stdio> <exit_code range="1:" /> </stdio> <command> Rscript $__tool_directory__/annoPeakFigure.R "$DMR" "$annoPeakFigure1" "$annoPeakFigure2"</command> <inputs> <param optional="false" format="bed" name="DMR" type="data" value="" help="Bumphunter peaks." label="[required] file"> <validator type="empty_field" message="This field is required."/> </param> </inputs> <outputs> <data format="png" name="annoPeakFigure1" label="annoPeakUpset.png"/> <data format="png" name="annoPeakFigure2" label="annoPeakAnnoBar.png"/> </outputs> <tests> <test> <param name="test"> <element name="test-data"> <collection type="data"> <element name="DMR" value="test-data/DMR.bed"/> </collection> </element> </param> <output format="png" name="annoPeakFigure" label="test-data/annoPeakUpset.png"/> <output format="png" name="annoPeakFigure" label="test-data/annoPeakAnnoBar.png"/> </test> </tests> <help> **Description** </help> <citations> DMR </citations> </tool>