Mercurial > repos > testtool > find_dmr

comparison findDMR/findDMR.xml @ 13:3735f4bd0a2d draft

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author testtool
date Mon, 12 Jun 2017 11:05:56 -0400
parents 083895dbc289
children 9de797a673ad
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12:083895dbc289 13:3735f4bd0a2d
5 <stdio> 5 <stdio>
6 <exit_code range="1:" /> 6 <exit_code range="1:" />
7 </stdio> 7 </stdio>
8 <command> Rscript $__tool_directory__/findDMR.R "$input1" "$input2" "$output" </command> 8 <command> Rscript $__tool_directory__/findDMR.R "$input1" "$input2" "$output" </command>
9 <inputs> 9 <inputs>
10 <param name="input1" format="Rdata" label="GenomicRatioSet.Rdata" help="e.g. 'GSE51547'"/> 10 <param name="input1" type="data" format="Rdata" label="GenomicRatioSet.Rdata" help="e.g. 'GSE51547'"/>
11 <param name="input2" format="txt" label="PhenoTab.txt" help="ID and Phenotype table"/> 11 <param name="input2" type="data" format="txt" label="PhenoTab.txt" help="ID and Phenotype table"/>
12 </inputs> 12 </inputs>
13 <outputs> 13 <outputs>
14 <data format="txt" name="output" label="findDMR.txt"/> 14 <data format="txt" name="output" label="findDMR.txt"/>
15 </outputs> 15 </outputs>
16 <tests> 16 <tests>