comparison findDMR/findDMR.xml @ 2:f13c6d0d664a draft

Uploaded

1:3c3eb51a6414

<tool id="DMR" name="findDMR" version="1.16.2">
  <requirements>
    <tool_dependency>
        <package name="R" version="3.2.1">
            <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
        </package>
      </tool_dependency>
</requirements>
<stdio>
   <exit_code range="1:" />
</stdio>
  <command> Rscript $__tool_directory__/findDMR.R "$GSMTable" "$IlmnTable" "$gmTable" "$cutoff" "$clusterSize" "$DMR"</command>
  <inputs>

2:f13c6d0d664a

<tool id="DMR" name="findDMR" version="1.16.2">
  <requirements>
         <requirement type="package" version="3.2.1">R</requirement>
     </requirements>
<stdio>
   <exit_code range="1:" />
</stdio>
  <command> Rscript $__tool_directory__/findDMR.R "$GSMTable" "$IlmnTable" "$gmTable" "$cutoff" "$clusterSize" "$DMR"</command>
  <inputs>