bioconductor-minfi
Rscript $__tool_directory__/findSNPs.R "$input" "$output"
**What it does**
Function To Retrieve The Chromosome And The Position Of Each SNP On A Given Affymetrix SNP Array
**Input**
GenomicRatioSet object
**Output**
Text file containing information on which probes contains SNPs
10.1093/bioinformatics/btu049