comparison GRsetFromGEO/tool_dependencies.xml @ 23:336772e963f2 draft

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author testtool
date Thu, 13 Apr 2017 08:00:02 -0400
parents 59122070e61d
children 104499c775e8
comparison
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22:3381429d7391 23:336772e963f2
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="minfi" version="1.16.0"> 3 <package name="libcurl" version="7.35">
4 <repository changeset_revision="d0cee75b3e2e" name="package_minfi_1_16_0" owner="nturaga" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="R" version="3.2.1"> 6 <package name="R" version="3.2.1">
7 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="minfi" version="1.20.2">
10 <install version="1.0">
11 <actions>
12 <action type="setup_r_environment">
13 <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
14 <package name="libcurl" version="7.35" />
15 </repository>
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17 <package name="R" version="3.2.1" />
18 </repository>
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47 <package>https://depot.galaxyproject.org/package/noarch/XML_3.98-1.3.tar.gz</package>
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73 <package>https://depot.galaxyproject.org/package/noarch/reshape_0.8.5.tar.gz</package>
74 <package>https://depot.galaxyproject.org/package/noarch/quadprog_1.5-5.tar.gz</package>
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77 <package>https://depot.galaxyproject.org/package/noarch/dichromat_2.0-0.tar.gz</package>
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81 <package>https://depot.galaxyproject.org/package/noarch/gtable_0.2.0.tar.gz</package>
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88 <package>https://depot.galaxyproject.org/package/noarch/gridBase_0.4-7.tar.gz</package>
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90 <package>https://depot.galaxyproject.org/package/noarch/NMF_0.20.6.tar.gz</package>
91 <package>https://depot.galaxyproject.org/package/noarch/irlba_2.0.0.tar.gz</package>
92 <package>https://depot.galaxyproject.org/package/noarch/igraph_1.0.1.tar.gz</package>
93 <package>https://depot.galaxyproject.org/package/noarch/mixOmics_5.2.0.tar.gz</package>
94 <package>https://bioarchive.galaxyproject.org/minfi_1.16.0.tar.gz</package>
95 <package>https://depot.galaxyproject.org/package/noarch/getopt_1.20.0.tar.gz</package>
96 <package>https://bioconductor.org/packages/release/data/experiment/src/contrib/FlowSorted.Blood.450k_1.8.0.tar.gz</package>
97 </action>
98 </actions>
99 </install>
100 <readme>
101 </readme>
8 </package> 102 </package>
9 </tool_dependency> 103 </tool_dependency>