Mercurial > repos > testtool > geo_data
comparison GRsetFromGEO/GRsetFromGEO.xml @ 52:7aeee7c02c4d draft
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author | testtool |
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date | Mon, 24 Apr 2017 12:19:55 -0400 |
parents | af3db4a42f9e |
children |
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51:6ee949c61f20 | 52:7aeee7c02c4d |
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11 <command> Rscript $__tool_directory__/GRsetFromGEO.R "$GSE" "$output" </command> | 11 <command> Rscript $__tool_directory__/GRsetFromGEO.R "$GSE" "$output" </command> |
12 <inputs> | 12 <inputs> |
13 <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> | 13 <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> |
14 </inputs> | 14 </inputs> |
15 <outputs> | 15 <outputs> |
16 <data format="rdata" name="output" label="GRsetFromGEO.rdata"/> | 16 <data format="RDdata" name="output" label="GRsetFromGEO.RData"/> |
17 </outputs> | 17 </outputs> |
18 <tests> | 18 <tests> |
19 <test> | 19 <test> |
20 <param name="test"> | 20 <param name="test"> |
21 <element name="test-data"> | 21 <element name="test-data"> |
22 <collection type="data"> | 22 <collection type="data"> |
23 <element name="GSE" value="GSE51547"/> | 23 <element name="GSE" value="GSE51547"/> |
24 </collection> | 24 </collection> |
25 </element> | 25 </element> |
26 </param> | 26 </param> |
27 <output format="rdata" name="output" label="test-data/out.Rdata"/> | 27 <output type="data" format="RData" name="output" label="test-data/out.RData"/> |
28 </test> | 28 </test> |
29 </tests> | 29 </tests> |
30 <help> | 30 <help> |
31 **Description** | 31 **Description** |
32 </help> | 32 </help> |