Mercurial > repos > testtool > geo_data
view GRsetFromGEO/GRsetFromGEO.xml @ 29:118e636a5f95 draft
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author | testtool |
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date | Thu, 13 Apr 2017 11:49:05 -0400 |
parents | 3d281ad15b83 |
children | ceced09589d9 |
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<tool id="GRset" name="GRsetFromGEO" version="1.16.2"> <requirements> <requirement name="package_r_3_2_1" type="package" version="3.2.1">R</requirement> </requirements> <stdio> <exit_code range="1:" /> </stdio> <command> Rscript $__tool_directory__/GRsetFromGEO.R "$GSE" "$output" </command> <inputs> <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> </inputs> <outputs> <data type="galaxy.datatypes.binary:RData" name="output" label="GenomicRatioSet.RData"/> </outputs> <tests> <test> <param name="test"> <element name="test-data"> <collection type="data"> <element name="GSE" value="GSE51547"/> </collection> </element> </param> <output type="galaxy.datatypes.binary:RData" name="output" label="test-data/GenomicRatioSet.RData"/> </test> </tests> <help> Reading Illumina methylation array data from GEO </help> <citations> xxx </citations> </tool>