# HG changeset patch
# User testtool
# Date 1493040578 14400
# Node ID 925945cca45fdbe86efeb7edbc889c935842329a
# Parent  baded0f1630d59fb343412d5ed2530bda78d643a
Uploaded

diff -r baded0f1630d -r 925945cca45f GRsetFromGEO/GRsetFromGEO.xml
--- a/GRsetFromGEO/GRsetFromGEO.xml	Mon Apr 24 09:17:26 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.xml	Mon Apr 24 09:29:38 2017 -0400
@@ -1,6 +1,6 @@
-<tool id="GRset" name="GRsetFromGEO" version="1.16.2">
+<tool id="GetGEO" name="GRsetFromGEO" version="1.16.2">
   <description>
-Reading Illumina methylation array data from GEO
+    Reading Illumina methylation array data from GEO
   </description>
   <requirements>
          <requirement type="package" version="3.2.1">R</requirement>
@@ -10,9 +10,7 @@
 </stdio>
   <command> Rscript $__tool_directory__/GRsetFromGEO.R "$GSE" "$output" </command>
   <inputs>
-    <param optional="false" format="txt" name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'">
-      <validator type="empty_field" message="This field is required."/>
-    </param>
+     <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/>
   </inputs>
   <outputs>
     <data format="rdata" name="output" label="GRsetFromGEO.rdata"/>
@@ -20,18 +18,19 @@
   <tests>
     <test>
       <param name="test">
-      <element name="test-data"/>
+      <element name="test-data">
           <collection type="data">
-              <element name="GSE" value="GSE51547"/>
+                <element name="GSE" value="GSE51547"/>
           </collection>
+        </element>
         </param>
-        <output format="rdata" name="output" label="test-data/out.rdata"/>
+        <output format="rdata"  name="output" label="test-data/out.Rdata"/>
         </test>
     </tests>
   <help>
-**Reading Illumina methylation array data from GEO**
+**Description**
 </help>
 <citations>
-DMR
+GEO
 </citations>
 </tool>