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changeset 52:7aeee7c02c4d draft

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Uploaded
author testtool
date Mon, 24 Apr 2017 12:19:55 -0400
parents 6ee949c61f20
children 46acdba0f6d8
files GRsetFromGEO/GRsetFromGEO.R GRsetFromGEO/GRsetFromGEO.xml
diffstat 2 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/GRsetFromGEO/GRsetFromGEO.R	Mon Apr 24 12:04:10 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.R	Mon Apr 24 12:19:55 2017 -0400
@@ -1,3 +1,4 @@
+require("BiocGenerics", quietly = TRUE)
 require("GEOquery", quietly = TRUE)
 require("minfi", quietly = TRUE)
 require("FDb.InfiniumMethylation.hg19", quietly = TRUE)
--- a/GRsetFromGEO/GRsetFromGEO.xml	Mon Apr 24 12:04:10 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.xml	Mon Apr 24 12:19:55 2017 -0400
@@ -13,7 +13,7 @@
      <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/>
   </inputs>
   <outputs>
-    <data format="rdata" name="output" label="GRsetFromGEO.rdata"/>
+    <data format="RDdata" name="output" label="GRsetFromGEO.RData"/>
   </outputs>
   <tests>
     <test>
@@ -24,7 +24,7 @@
           </collection>
         </element>
         </param>
-        <output format="rdata"  name="output" label="test-data/out.Rdata"/>
+        <output type="data" format="RData"  name="output" label="test-data/out.RData"/>
         </test>
     </tests>
   <help>