comparison getGEO/getGEO.xml @ 28:315b0dc61049 draft

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author testtool
date Wed, 08 Feb 2017 08:58:15 -0500
parents c9ab017e40b5
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27:c9ab017e40b5 28:315b0dc61049
1 <tool id="GEO" name="getGEO" version="1.16.2"> 1 <tool id="GEO" name="getGEO" version="1.16.2">
2 <description> 2 <?xml version='1.0' encoding='utf-8'?>
3 samples records
4 </description>
5 <requirements> 3 <requirements>
6 <requirement type="package" version="3.2.1">R</requirement> 4 <tool_dependency>
7 </requirements> 5 <package name="R" version="3.2.1">
6 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
7 </package>
8 </tool_dependency>
9 </requirements>
8 <stdio> 10 <stdio>
9 <exit_code range="1:" /> 11 <exit_code range="1:" />
10 </stdio> 12 </stdio>
11 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> 13 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command>
12 <inputs> 14 <inputs>