Mercurial > repos > testtool > get_geo
comparison getGEO/getGEO.xml @ 15:c035531adb1b draft
Uploaded
| author | testtool |
|---|---|
| date | Thu, 19 Jan 2017 06:44:40 -0500 |
| parents | a0fefac1e0e1 |
| children | 73cd17bea9c4 |
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| 14:a0fefac1e0e1 | 15:c035531adb1b |
|---|---|
| 2 <macros> | 2 <macros> |
| 3 <import>getGEO_macros.xml</import> | 3 <import>getGEO_macros.xml</import> |
| 4 </macros> | 4 </macros> |
| 5 <expand macro="requirements" /> | 5 <expand macro="requirements" /> |
| 6 <stdio> | 6 <stdio> |
| 7 <exit_code range="1:" /> | 7 <exit_code range="1:" /> |
| 8 </stdio> | 8 </stdio> |
| 9 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> | 9 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> |
| 10 <inputs> | 10 <inputs> |
| 11 <param optional="false" format="csv" name="GSMTable" type="data" value="" help="GEO table of data." label="[required] GSMTable"> | 11 <param optional="false" format="csv" name="GSMTable" type="data" value="" help="GEO table of data." label="[required] GSMTable"> |
| 12 <validator type="empty_field" message="This field is required."/> | 12 <validator type="empty_field" message="This field is required."/> |