Mercurial > repos > testtool > get_gr_set
comparison GRsetFromGEO/GRsetFromGEO.xml @ 47:b68434e4db0e draft
Uploaded
| author | testtool |
|---|---|
| date | Tue, 08 Aug 2017 11:52:38 -0400 |
| parents | ed948c608056 |
| children | bd3036f7baf4 |
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| 46:ed948c608056 | 47:b68434e4db0e |
|---|---|
| 5 <requirement type="package" version="0.6.0">bioconductor-illuminahumanmethylation450kanno.ilmn12.hg19</requirement> | 5 <requirement type="package" version="0.6.0">bioconductor-illuminahumanmethylation450kanno.ilmn12.hg19</requirement> |
| 6 </requirements> | 6 </requirements> |
| 7 <stdio> | 7 <stdio> |
| 8 <exit_code range="1:" /> | 8 <exit_code range="1:" /> |
| 9 </stdio> | 9 </stdio> |
| 10 <command>Rscript $__tool_directory__/GRsetFromGEO.R $input output.rdata</command> | 10 <command>Rscript $__tool_directory__/GRsetFromGEO.R "$input" "$output"</command> |
| 11 <inputs> | 11 <inputs> |
| 12 <param format="text" name="input" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> | 12 <param format="text" name="input" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> |
| 13 </inputs> | 13 </inputs> |
| 14 <outputs> | 14 <outputs> |
| 15 <data format="rdata" name="output" label="output.rdata" /> | 15 <data format="rdata" name="output" label="output.rdata" /> |