Mercurial > repos > testtool > get_gr_set
comparison GRsetFromGEO/GRsetFromGEO.xml @ 35:f49921bb80eb draft
Uploaded
| author | testtool |
|---|---|
| date | Sun, 23 Jul 2017 12:36:50 -0400 |
| parents | 4b71f1bfc45e |
| children | bee48babf30d |
comparison
equal
deleted
inserted
replaced
| 34:4b71f1bfc45e | 35:f49921bb80eb |
|---|---|
| 1 <tool id="getGRset" name="GRsetFromGEO"> | 1 <tool id="getGRset" name="GRsetFromGEO"> |
| 2 <description>downloads data from GEO</description> | 2 <description>downloads data from GEO</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="0.6.0">bioconductor-illuminahumanmethylation450kanno.ilmn12.hg19</requirement> | |
| 5 <requirement type="package" version="1.20.0">bioconductor-minfi</requirement> | 4 <requirement type="package" version="1.20.0">bioconductor-minfi</requirement> |
| 5 <requirement type="package" version="0.6.0">'bioconductor-illuminahumanmethylation450kanno.ilmn12.hg19'</requirement> | |
| 6 </requirements> | 6 </requirements> |
| 7 <stdio> | 7 <stdio> |
| 8 <exit_code range="1:" /> | 8 <exit_code range="1:" /> |
| 9 </stdio> | 9 </stdio> |
| 10 <command>Rscript $__tool_directory__/GRsetFromGEO.R $input output.RData</command> | 10 <command>Rscript $__tool_directory__/GRsetFromGEO.R $input output.RData</command> |