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view GRsetFromGEO/GRsetFromGEO.R @ 15:6c3be09de899 draft

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author testtool
date Thu, 29 Jun 2017 08:04:13 -0400
parents c3b28b232e64
children ceaf71c74547
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require("minfi", quietly = TRUE)

options(warn = -1)
options('download.file.method'='wget')

args <- commandArgs(trailingOnly = TRUE)
GSE = args[1] 
output = args[2] 

GRset <- getGenomicRatioSetFromGEO(GSE)

save(GRset,file = output)