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view GRsetFromGEO/GRsetFromGEO.R @ 55:e23909ae6676 draft

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author testtool
date Thu, 10 Aug 2017 06:26:46 -0400
parents 5752f23e451f
children d7cf4a35f827
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options(warn = -1)
options('download.file.method.GEOquery' = 'wget')
options('GEOquery.inmemory.gpl'=FALSE)


args <- commandArgs(trailingOnly = TRUE)
input = args[1] 
output = args[2] 

GRset <- minfi::getGenomicRatioSetFromGEO(input)

save(GRset,file = output)