# HG changeset patch # User testtool # Date 1502360422 14400 # Node ID 5752f23e451ff39c4e74a3eb9cb614edc0717bb7 # Parent 5547aeb4ff23b58a5bcafa79715553ac2ed3851b Uploaded diff -r 5547aeb4ff23 -r 5752f23e451f GRsetFromGEO/GRsetFromGEO.R --- a/GRsetFromGEO/GRsetFromGEO.R Thu Aug 10 06:19:48 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.R Thu Aug 10 06:20:22 2017 -0400 @@ -1,5 +1,4 @@ require(minfi, quietly = TRUE) -require(IlluminaHumanMethylation450kanno.ilmn12.hg19, quietly = TRUE) options(warn = -1) options('download.file.method.GEOquery' = 'wget') @@ -10,8 +9,8 @@ input = args[1] output = args[2] -GRset <- minfi::getGenomicRatioSetFromGEO(input) +GRset <- getGenomicRatioSetFromGEO(input) save(GRset,file = output) -??getGenomicRatioSetFromGEO +