Mercurial > repos > testtool > get_gsm

comparison getGSMdata/getGSMdata.xml @ 29:225b0a8f9f3e draft

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author testtool
date Thu, 15 Jun 2017 06:27:44 -0400
parents fd7bfd438a65
children 0f52e287968e
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28:c1bf6f112a19 29:225b0a8f9f3e
1 <tool id="GSM" name="getGSMdata" version="1.16.2"> 1 <tool id="GSM" name="getGSMdata" version="1.16.2">
2 <description>
3 from GEO
4 </description>
5 <requirements> 2 <requirements>
6 <requirement type="package" version="3.2.1">R</requirement> 3 <requirement type="package" version="1.20.0">entrez-direct</requirement>
7 </requirements> 4 </requirements>
8 <stdio> 5 <stdio>
9 <exit_code range="1:" /> 6 <exit_code range="1:" />
10 </stdio> 7 </stdio>
11 <command> Rscript $__tool_directory__/getGSMdata.R "$GSE" "$GSMTable" </command> 8 <command> Rscript $__tool_directory__/getGSMdata.R "$GSE" "$GSMTable" </command>