Mercurial > repos > testtool > get_gsm
comparison getGSMdata/getGSMdata.xml @ 14:44f074a0bfca draft
Uploaded
| author | testtool |
|---|---|
| date | Mon, 06 Feb 2017 06:39:58 -0500 |
| parents | 2a7c249bfaae |
| children | b58693ef0904 |
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| 13:33306dcd2bb8 | 14:44f074a0bfca |
|---|---|
| 1 <tool id="GSM" name="getGSMdata" version="1.16.2"> | 1 <tool id="GSM" name="getGSMdata" version="1.16.2"> |
| 2 <requirements> | 2 <requirements> |
| 3 <tool_dependency> | 3 <tool_dependency> |
| 4 <package name="methyldata_1_16_2" version="1.16.2"> | 4 <package name="R" version="3.2.1"> |
| 5 <repository name="methyldata_1_16_2" owner="testtool" prior_installation_required="True" /> | 5 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 6 </package> | 6 </package> |
| 7 </tool_dependency> | 7 </tool_dependency> |
| 8 </requirements> | 8 </requirements> |
| 9 <stdio> | 9 <stdio> |
| 10 <exit_code range="1:" /> | 10 <exit_code range="1:" /> |
| 11 </stdio> | 11 </stdio> |
| 12 <command> Rscript $__tool_directory__/getGSMdata.R "$GSE" "$GSMTable" </command> | 12 <command> Rscript $__tool_directory__/getGSMdata.R "$GSE" "$GSMTable" </command> |