Mercurial > repos > thanhlv > bakta
annotate test-data/TEST_3/TEST_3.embl @ 5:7686d59927cd draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
author | thanhlv |
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date | Fri, 28 Apr 2023 18:25:36 +0000 |
parents | 54ca20519f70 |
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rev | line source |
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54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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1 ID contig_1; ; circular; DNA; ; PRO; 1330 BP. |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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2 XX |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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changeset
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3 AC contig_1; |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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4 XX |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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5 DE plasmid unnamed1, complete sequence |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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6 XX |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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7 OS . |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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8 OC . |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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9 XX |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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10 CC Annotated with Bakta |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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11 CC Software: v1.5.0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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12 CC Database: v4.0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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13 CC DOI: 10.1099/mgen.0.000685 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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14 CC URL: github.com/oschwengers/bakta |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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15 CC |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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16 CC ##Genome Annotation Summary:## |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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17 CC Annotation Date :: 09/16/2022, 07:32:21 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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18 CC Annotation Pipeline :: Bakta |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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19 CC Annotation Software version :: v1.5.0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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20 CC Annotation Database version :: v4.0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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21 CC CDSs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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22 CC tRNAs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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23 CC tmRNAs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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24 CC rRNAs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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25 CC ncRNAs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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26 CC regulatory ncRNAs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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27 CC CRISPR Arrays :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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28 CC oriCs/oriVs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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29 CC oriTs :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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30 CC gaps :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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31 CC pseudogenes :: 0 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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32 XX |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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changeset
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33 FH Key Location/Qualifiers |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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34 FH |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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changeset
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35 FT source 1..1330 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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36 FT /mol_type="genomic DNA" |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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37 FT /plasmid="unnamed1" |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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38 XX |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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39 SQ Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other; |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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40 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 60 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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41 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 120 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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42 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg 180 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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43 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt 240 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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44 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt 300 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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45 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac 360 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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46 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa 420 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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47 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga 480 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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48 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt 540 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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49 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga 600 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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50 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga 660 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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51 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag 720 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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52 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt 780 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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53 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga 840 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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54 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc 900 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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55 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc 960 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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56 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa 1020 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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57 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 1080 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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58 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 1140 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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59 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 1200 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
changeset
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60 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 1260 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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61 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 1320 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff
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62 cttctatttg 1330 |
54ca20519f70
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
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63 // |