Mercurial > repos > thanhlv > bakta

annotate test-data/TEST_3/TEST_3.gbff @ 5:7686d59927cd draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
author thanhlv
date Fri, 28 Apr 2023 18:25:36 +0000
parents 54ca20519f70
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
1 LOCUS contig_1 1330 bp DNA circular BCT 16-SEP-2022
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
2 DEFINITION plasmid unnamed1, complete sequence.
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
3 ACCESSION contig_1
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
4 VERSION contig_1
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
5 KEYWORDS .
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
6 SOURCE None
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
7 ORGANISM .
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
8 .
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
9 COMMENT Annotated with Bakta
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
10 Software: v1.5.0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
11 Database: v4.0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
12 DOI: 10.1099/mgen.0.000685
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
13 URL: github.com/oschwengers/bakta
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
14
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
15 ##Genome Annotation Summary:##
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
16 Annotation Date :: 09/16/2022, 07:32:21
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
17 Annotation Pipeline :: Bakta
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
18 Annotation Software version :: v1.5.0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
19 Annotation Database version :: v4.0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
20 CDSs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
21 tRNAs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
22 tmRNAs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
23 rRNAs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
24 ncRNAs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
25 regulatory ncRNAs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
26 CRISPR Arrays :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
27 oriCs/oriVs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
28 oriTs :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
29 gaps :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
30 pseudogenes :: 0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
31 FEATURES Location/Qualifiers
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
32 source 1..1330
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
33 /mol_type="genomic DNA"
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
34 /plasmid="unnamed1"
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
35 ORIGIN
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
36 1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
37 61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
38 121 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
39 181 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
40 241 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
41 301 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
42 361 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
43 421 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
44 481 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
45 541 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
46 601 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
47 661 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
48 721 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
49 781 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
50 841 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
51 901 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
52 961 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
53 1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
54 1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
55 1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
56 1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
57 1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
58 1321 cttctatttg
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
thanhlv
parents:
diff changeset
59 //