Mercurial > repos > thanhlv > clinker

diff clinker.xml @ 1:b2eb9231d95d draft default tip

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planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/clinker commit a8db5ed4544fd91f7ff43284d1ddfcb9ff76d84c-dirty
author thanhlv
date Thu, 21 Jul 2022 15:32:21 +0000
parents 315f554107d7
children
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--- a/clinker.xml	Thu Jul 21 11:17:39 2022 +0000
+++ b/clinker.xml	Thu Jul 21 15:32:21 2022 +0000
@@ -11,8 +11,8 @@
         #import re
         mkdir gbk &&
         #for $counter, $input in enumerate($gbk):
-            #set $_input_file = re.sub(r'(\s|\(|\)|:|!)', '_', str($input.element_identifier))
-            ln -sf '$input' 'gbk/${$_input_file}' &&
+            #set $_input_file = re.sub(r'(\s|\(|\)|:|!)|\.gbk', '_', str($input.element_identifier))
+            ln -sf '$input' 'gbk/${$_input_file}.gbk' &&
         #end for
         clinker
         $no_align