view macros.xml @ 0:c0473c69ac9f draft

planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/metaphlan/

<?xml version="1.0"?>
<macros>
    <token name="@TOOL_VERSION@">4.0.3</token>
    <token name="@VERSION_SUFFIX@">1</token>
    <token name="@PROFILE@">22.05</token>
    <!-- Metaphlan DB compatible with this version of Metaphlan
    v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions --> 
    <token name="@IDX_VERSION@">SGB</token>
    <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token>
    <xml name="edam_ontology">
        <edam_topics>
            <edam_topic>topic_3174</edam_topic>
            <edam_topic>topic_0194</edam_topic>
        </edam_topics>
        <edam_operations>
            <edam_operation>operation_2478</edam_operation>
            <edam_operation>operation_0324</edam_operation>
        </edam_operations>
    </xml>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@TOOL_VERSION@">metaphlan</requirement>
            <yield/>
        </requirements>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="doi">10.7554/eLife.65088</citation>
        </citations>
    </xml>
</macros>