Mercurial > repos > thanhlv > humann_strain_profiler
annotate macros.xml @ 0:db4f6b239f5e draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
author | thanhlv |
---|---|
date | Mon, 13 Feb 2023 16:18:40 +0000 |
parents | |
children |
rev | line source |
---|---|
0
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
2 <macros> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
3 <token name="@TOOL_VERSION@">3.6.0</token> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
4 <token name="@VERSION_SUFFIX@">0</token> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
5 <token name="@PROFILE@">22.01</token> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
6 <xml name="edam_ontology"> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
7 <edam_topics> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
8 <edam_topic>topic_3174</edam_topic> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
9 <edam_topic>topic_0194</edam_topic> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
10 </edam_topics> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
11 <edam_operations> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
12 <edam_operation>operation_2478</edam_operation> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
13 <edam_operation>operation_0324</edam_operation> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
14 </edam_operations> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
15 </xml> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
16 <xml name="requirements"> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
17 <requirements> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
18 <requirement type="package" version="@TOOL_VERSION@">humann</requirement> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
19 <yield/> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
20 </requirements> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
21 </xml> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
22 <xml name="version"> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
23 <version_command>humann --version</version_command> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
24 </xml> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
25 <token name="@HELP_HEADER@"> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
26 What it does |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
27 ============ |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
28 |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
29 HUMAnN is a pipeline for efficiently and accuretly profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data. |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
30 |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
31 Read more about the tool: http://huttenhower.sph.harvard.edu/humann |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
32 </token> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
33 <xml name="citations"> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
34 <citations> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
35 <citation type="doi">10.7554/eLife.65088</citation> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
36 <citation type="doi">10.1371/journal.pcbi.1002358</citation> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
37 </citations> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
38 </xml> |
db4f6b239f5e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann commit 6b06711cfba45855d5a992ed1c73c472eaef644f
thanhlv
parents:
diff
changeset
|
39 </macros> |