Mercurial > repos > thanhlv > socru
changeset 4:bf0efbba5e8d draft
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/socru commit 5215b942916d8c1186656f098cfdf4db52b5854b-dirty
| author | thanhlv |
|---|---|
| date | Fri, 17 May 2019 11:19:28 -0400 |
| parents | 686ffd8c4f97 |
| children | 602f0fe854a3 |
| files | macros.xml socru.xml |
| diffstat | 2 files changed, 9 insertions(+), 6 deletions(-) [+] |
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--- a/macros.xml Thu Feb 14 10:31:51 2019 -0500 +++ b/macros.xml Fri May 17 11:19:28 2019 -0400 @@ -10,9 +10,9 @@ <version_command>socru --version</version_command> </xml> - <!-- <xml name="citations"> + <xml name="citations"> <citations> - <citation type="doi">10.7717/peerj.5233</citation> + <citation type="doi">10.1101/543702</citation> </citations> - </xml> --> + </xml> </macros> \ No newline at end of file
--- a/socru.xml Thu Feb 14 10:31:51 2019 -0500 +++ b/socru.xml Fri May 17 11:19:28 2019 -0400 @@ -17,10 +17,13 @@ --top_blast_hits top_blast_hits.tsv #if str($opt_args.max_bases_from_ends) != "" - --max_bases_from_ends $$opt_args.max_bases_from_ends + --max_bases_from_ends $opt_args.max_bases_from_ends #end if - --not_circular $opt_args.not_circular + #if $opt_args.not_circular + --not_circular + #end if + --min_bit_score $opt_args.min_bit_score --min_alignment_length $opt_args.min_alignment_length @@ -499,5 +502,5 @@ Documentation can be found at `<https://github.com/quadram-institute-bioscience/socru>`_. ]]></help> - <!-- <expand macro="citations" /> --> + <expand macro="citations" /> </tool>