diff binary2label.xml @ 0:668f8dabb346 draft

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/\binary2labelimage commit 77f1ea5beca40d8b5851fe366e84c32d5df5d6f8
author thomaswollmann
date Sat, 11 Feb 2017 17:28:57 -0500
parents
children f772af27a6de
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/binary2label.xml	Sat Feb 11 17:28:57 2017 -0500
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+<tool id="binary2labelimage" name="Binary 2 Label" version="0.1">
+  <description>Converts Binary to Label Image</description>
+  <requirements>
+    <requirement type="package" version="0.12.3" >scikit-image</requirement>
+    <requirement type="package" version="4.0.0">pillow</requirement>
+    <requirement type="package" version="1.12">numpy</requirement>
+  </requirements>
+  <command>
+        <![CDATA[
+        python "$__tool_directory__/binary2label.py" '$input' '$output'
+        ]]>
+  </command>
+  <inputs>
+    <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/>
+  </inputs>
+  <outputs>
+    <data format="tiff" name="output"/>
+  </outputs>
+  <tests>
+    <test>
+	    <param name="input" value="galaxyIcon_noText.tif" />
+	    <output name="output" value="label.tif" ftype="tiff" />
+    </test>
+  </tests>
+  <help>This tool assigns every object an own grey value.</help>
+  <citations>
+      <citation type="doi">10.7717/peerj.453</citation>
+  </citations>
+</tool>