Mercurial > repos > thomaswollmann > detection_viz
comparison detection_viz.xml @ 1:ff66bae1f7f8 draft default tip
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/detection_viz/ commit 787ebcc8daa1834214bc92c201c921c704ef2d1f
| author | thomaswollmann |
|---|---|
| date | Mon, 07 Jan 2019 05:36:36 -0500 |
| parents | 629d9e8ca64c |
| children |
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| 0:629d9e8ca64c | 1:ff66bae1f7f8 |
|---|---|
| 4 <requirement type="package" version="0.14.1" >scikit-image</requirement> | 4 <requirement type="package" version="0.14.1" >scikit-image</requirement> |
| 5 <requirement type="package" version="3.0.2" >matplotlib</requirement> | 5 <requirement type="package" version="3.0.2" >matplotlib</requirement> |
| 6 </requirements> | 6 </requirements> |
| 7 <command> | 7 <command> |
| 8 <![CDATA[ | 8 <![CDATA[ |
| 9 python '$__tool_directory__/detection_viz.py' '$input' '$output' --stroke_size $thickness --circle_radius $circle_radius $tp $fn $fp | 9 python '$__tool_directory__/detection_viz.py' '$input' ./tmp.png |
| 10 ]]> | 10 --stroke_size $thickness --circle_radius $circle_radius $tp $fn $fp |
| 11 && mv ./tmp.png '$output' | |
| 12 ]]> | |
| 11 </command> | 13 </command> |
| 12 <inputs> | 14 <inputs> |
| 13 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/> | 15 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/> |
| 14 <param name="tp" type="boolean" checked="false" falsevalue="" truevalue="--tp"/> | 16 <param name="tp" type="boolean" checked="false" falsevalue="" truevalue="--tp"/> |
| 15 <param name="fn" type="boolean" checked="false" falsevalue="" truevalue="--fn"/> | 17 <param name="fn" type="boolean" checked="false" falsevalue="" truevalue="--fn"/> |