comparison labelimage2points.xml @ 0:732d95b2b030 draft default tip

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/labelimage2points/ commit a0ba841e8b3aee770a3243155bedfac0adf9a5a6

0:732d95b2b030

<tool id="labelimage2points" name="Label 2 Points" version="0.1">
    <description>Converts label image to points.</description>
    <requirements>
        <requirement type="package" version="0.12.3" >scikit-image</requirement>
        <requirement type="package" version="0.21.0" >pandas</requirement>
    </requirements>
    <command>
        <![CDATA[
        python '$__tool_directory__/labelimage2points.py' '$input' '$output'
        ]]>
    </command>
    <inputs>
        <param name="input" type="data" format="tiff,png,jpg,bmp" label="Label image file"/>
    </inputs>
    <outputs>
        <data format="csv" name="output"/>
    </outputs>
    <tests>
        <test>
            <param name="input" value="label.tif" />
            <output name="output" value="points.csv" ftype="csv" />
        </test>
    </tests>
    <help>Calculates the center of mass for all differently colored regions in the image.</help>
    <citations>
        <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
    </citations>
</tool>