Mercurial > repos > thondeboer > neat_genreads
comparison test-data/chrMT-PE-VCF-BAM-EXCLUDELIST-genMutModel.p @ 0:6e75a84e9338 draft
planemo upload commit e96b43f96afce6a7b7dfd4499933aad7d05c955e-dirty
author | thondeboer |
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date | Tue, 15 May 2018 02:39:53 -0400 |
parents | |
children |
comparison
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-1:000000000000 | 0:6e75a84e9338 |
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1 (dp0 | |
2 S'HIGH_MUT_REGIONS' | |
3 p1 | |
4 (lp2 | |
5 (S'chrMT' | |
6 p3 | |
7 I8000 | |
8 I16000 | |
9 F0.000875 | |
10 tp4 | |
11 asS'COMMON_VARIANTS' | |
12 p5 | |
13 (lp6 | |
14 (g3 | |
15 I10749 | |
16 S'A' | |
17 p7 | |
18 S'G' | |
19 p8 | |
20 F1e-05 | |
21 tp9 | |
22 a(g3 | |
23 I11272 | |
24 S'G' | |
25 p10 | |
26 S'A' | |
27 p11 | |
28 F1e-05 | |
29 tp12 | |
30 a(g3 | |
31 I11742 | |
32 S'C' | |
33 p13 | |
34 S'T' | |
35 p14 | |
36 F1e-05 | |
37 tp15 | |
38 a(g3 | |
39 I13131 | |
40 S'-' | |
41 p16 | |
42 S'T' | |
43 p17 | |
44 F1e-05 | |
45 tp18 | |
46 a(g3 | |
47 I13272 | |
48 S'A' | |
49 p19 | |
50 S'G' | |
51 p20 | |
52 F1e-05 | |
53 tp21 | |
54 a(g3 | |
55 I13803 | |
56 S'G' | |
57 p22 | |
58 S'A' | |
59 p23 | |
60 F1e-05 | |
61 tp24 | |
62 a(g3 | |
63 I14066 | |
64 S'C' | |
65 p25 | |
66 S'T' | |
67 p26 | |
68 F1e-05 | |
69 tp27 | |
70 asS'SNP_TRANS_FREQ' | |
71 p28 | |
72 (dp29 | |
73 (S'A' | |
74 p30 | |
75 S'G' | |
76 p31 | |
77 tp32 | |
78 F1.0 | |
79 s(S'C' | |
80 p33 | |
81 g17 | |
82 tp34 | |
83 F1.0 | |
84 s(g31 | |
85 g30 | |
86 tp35 | |
87 F1.0 | |
88 ssS'SNP_FREQ' | |
89 p36 | |
90 F0.8571428571428571 | |
91 sS'TRINUC_MUT_PROB' | |
92 p37 | |
93 (dp38 | |
94 S'ACC' | |
95 p39 | |
96 F0.0 | |
97 sS'ATG' | |
98 p40 | |
99 F0.0 | |
100 sS'AAG' | |
101 p41 | |
102 F0.0 | |
103 sS'AAA' | |
104 p42 | |
105 F0.0 | |
106 sS'ATC' | |
107 p43 | |
108 F0.0 | |
109 sS'AAC' | |
110 p44 | |
111 F0.0041841004184100415 | |
112 sS'ATA' | |
113 p45 | |
114 F0.0 | |
115 sS'AGG' | |
116 p46 | |
117 F0.017241379310344827 | |
118 sS'CCT' | |
119 p47 | |
120 F0.003816793893129771 | |
121 sS'CTC' | |
122 p48 | |
123 F0.0 | |
124 sS'AGC' | |
125 p49 | |
126 F0.007751937984496124 | |
127 sS'ACA' | |
128 p50 | |
129 F0.0 | |
130 sS'AGA' | |
131 p51 | |
132 F0.0 | |
133 sS'CAT' | |
134 p52 | |
135 F0.004878048780487805 | |
136 sS'AAT' | |
137 p53 | |
138 F0.0 | |
139 sS'ATT' | |
140 p54 | |
141 F0.0 | |
142 sS'CTG' | |
143 p55 | |
144 F0.0 | |
145 sS'CTA' | |
146 p56 | |
147 F0.0 | |
148 sS'ACT' | |
149 p57 | |
150 F0.0 | |
151 sS'CAC' | |
152 p58 | |
153 F0.0 | |
154 sS'ACG' | |
155 p59 | |
156 F0.0 | |
157 sS'CAA' | |
158 p60 | |
159 F0.0 | |
160 sS'AGT' | |
161 p61 | |
162 F0.0 | |
163 sS'CCA' | |
164 p62 | |
165 F0.0 | |
166 sS'CCG' | |
167 p63 | |
168 F0.0 | |
169 sS'CCC' | |
170 p64 | |
171 F0.0 | |
172 sS'TAT' | |
173 p65 | |
174 F0.0 | |
175 sS'GGT' | |
176 p66 | |
177 F0.0 | |
178 sS'TGT' | |
179 p67 | |
180 F0.0 | |
181 sS'CGA' | |
182 p68 | |
183 F0.0 | |
184 sS'CAG' | |
185 p69 | |
186 F0.0 | |
187 sS'CGC' | |
188 p70 | |
189 F0.0 | |
190 sS'GAT' | |
191 p71 | |
192 F0.0 | |
193 sS'CGG' | |
194 p72 | |
195 F0.0 | |
196 sS'CTT' | |
197 p73 | |
198 F0.0 | |
199 sS'TGC' | |
200 p74 | |
201 F0.0 | |
202 sS'GGG' | |
203 p75 | |
204 F0.0 | |
205 sS'TAG' | |
206 p76 | |
207 F0.0 | |
208 sS'GGA' | |
209 p77 | |
210 F0.0 | |
211 sS'TAA' | |
212 p78 | |
213 F0.0 | |
214 sS'GGC' | |
215 p79 | |
216 F0.0 | |
217 sS'TAC' | |
218 p80 | |
219 F0.0 | |
220 sS'GAG' | |
221 p81 | |
222 F0.0 | |
223 sS'TCG' | |
224 p82 | |
225 F0.0 | |
226 sS'TTA' | |
227 p83 | |
228 F0.0 | |
229 sS'TTT' | |
230 p84 | |
231 F0.0 | |
232 sS'GAC' | |
233 p85 | |
234 F0.0 | |
235 sS'CGT' | |
236 p86 | |
237 F0.0 | |
238 sS'GAA' | |
239 p87 | |
240 F0.0 | |
241 sS'TCA' | |
242 p88 | |
243 F0.0 | |
244 sS'GCA' | |
245 p89 | |
246 F0.0 | |
247 sS'GTA' | |
248 p90 | |
249 F0.0 | |
250 sS'GCC' | |
251 p91 | |
252 F0.008264462809917356 | |
253 sS'GTC' | |
254 p92 | |
255 F0.0 | |
256 sS'GCG' | |
257 p93 | |
258 F0.0 | |
259 sS'GTG' | |
260 p94 | |
261 F0.0 | |
262 sS'TTC' | |
263 p95 | |
264 F0.0 | |
265 sS'GTT' | |
266 p96 | |
267 F0.0 | |
268 sS'GCT' | |
269 p97 | |
270 F0.0 | |
271 sS'TGA' | |
272 p98 | |
273 F0.0 | |
274 sS'TTG' | |
275 p99 | |
276 F0.0 | |
277 sS'TCC' | |
278 p100 | |
279 F0.0 | |
280 sS'TGG' | |
281 p101 | |
282 F0.0 | |
283 sS'TCT' | |
284 p102 | |
285 F0.0 | |
286 ssS'TRINUC_TRANS_PROBS' | |
287 p103 | |
288 (dp104 | |
289 (S'TTA' | |
290 p105 | |
291 S'TAA' | |
292 p106 | |
293 tp107 | |
294 F0.0 | |
295 s(S'TGA' | |
296 p108 | |
297 S'TCA' | |
298 p109 | |
299 tp110 | |
300 F0.0 | |
301 s(S'GAA' | |
302 p111 | |
303 S'GCA' | |
304 p112 | |
305 tp113 | |
306 F0.0 | |
307 s(S'ACG' | |
308 p114 | |
309 S'AGG' | |
310 p115 | |
311 tp116 | |
312 F0.0 | |
313 s(g108 | |
314 S'TTA' | |
315 p117 | |
316 tp118 | |
317 F0.0 | |
318 s(S'AAG' | |
319 p119 | |
320 S'ATG' | |
321 p120 | |
322 tp121 | |
323 F0.0 | |
324 s(S'TCA' | |
325 p122 | |
326 S'TGA' | |
327 p123 | |
328 tp124 | |
329 F0.0 | |
330 s(S'GAC' | |
331 p125 | |
332 S'GCC' | |
333 p126 | |
334 tp127 | |
335 F0.0 | |
336 s(S'CTT' | |
337 p128 | |
338 S'CGT' | |
339 p129 | |
340 tp130 | |
341 F0.0 | |
342 s(S'GGC' | |
343 p131 | |
344 S'GTC' | |
345 p132 | |
346 tp133 | |
347 F0.0 | |
348 s(g111 | |
349 S'GTA' | |
350 p134 | |
351 tp135 | |
352 F0.0 | |
353 s(S'AGA' | |
354 p136 | |
355 S'ACA' | |
356 p137 | |
357 tp138 | |
358 F0.0 | |
359 s(S'GCG' | |
360 p139 | |
361 S'GTG' | |
362 p140 | |
363 tp141 | |
364 F0.0 | |
365 s(S'TAA' | |
366 p142 | |
367 S'TCA' | |
368 p143 | |
369 tp144 | |
370 F0.0 | |
371 s(S'CCT' | |
372 p145 | |
373 S'CAT' | |
374 p146 | |
375 tp147 | |
376 F0.0 | |
377 s(S'GAG' | |
378 p148 | |
379 S'GCG' | |
380 p149 | |
381 tp150 | |
382 F0.0 | |
383 s(S'ATT' | |
384 p151 | |
385 S'AGT' | |
386 p152 | |
387 tp153 | |
388 F0.0 | |
389 s(S'CGT' | |
390 p154 | |
391 S'CTT' | |
392 p155 | |
393 tp156 | |
394 F0.0 | |
395 s(S'CAT' | |
396 p157 | |
397 S'CGT' | |
398 p158 | |
399 tp159 | |
400 F1.0 | |
401 s(g139 | |
402 S'GAG' | |
403 p160 | |
404 tp161 | |
405 F0.0 | |
406 s(g111 | |
407 S'GGA' | |
408 p162 | |
409 tp163 | |
410 F0.0 | |
411 s(g131 | |
412 S'GAC' | |
413 p164 | |
414 tp165 | |
415 F0.0 | |
416 s(S'TTG' | |
417 p166 | |
418 S'TCG' | |
419 p167 | |
420 tp168 | |
421 F0.0 | |
422 s(S'ATA' | |
423 p169 | |
424 S'AGA' | |
425 p170 | |
426 tp171 | |
427 F0.0 | |
428 s(S'TGG' | |
429 p172 | |
430 S'TCG' | |
431 p173 | |
432 tp174 | |
433 F0.0 | |
434 s(S'GAT' | |
435 p175 | |
436 S'GCT' | |
437 p176 | |
438 tp177 | |
439 F0.0 | |
440 s(S'GGG' | |
441 p178 | |
442 S'GAG' | |
443 p179 | |
444 tp180 | |
445 F0.0 | |
446 s(S'AAA' | |
447 p181 | |
448 S'AGA' | |
449 p182 | |
450 tp183 | |
451 F0.0 | |
452 s(S'CTA' | |
453 p184 | |
454 S'CGA' | |
455 p185 | |
456 tp186 | |
457 F0.0 | |
458 s(S'ACC' | |
459 p187 | |
460 S'AGC' | |
461 p188 | |
462 tp189 | |
463 F0.0 | |
464 s(g139 | |
465 S'GGG' | |
466 p190 | |
467 tp191 | |
468 F0.0 | |
469 s(S'AAC' | |
470 p192 | |
471 S'AGC' | |
472 p193 | |
473 tp194 | |
474 F1.0 | |
475 s(S'GTA' | |
476 p195 | |
477 S'GCA' | |
478 p196 | |
479 tp197 | |
480 F0.0 | |
481 s(S'ACA' | |
482 p198 | |
483 S'AGA' | |
484 p199 | |
485 tp200 | |
486 F0.0 | |
487 s(S'GCA' | |
488 p201 | |
489 S'GTA' | |
490 p202 | |
491 tp203 | |
492 F0.0 | |
493 s(S'CCG' | |
494 p204 | |
495 S'CGG' | |
496 p205 | |
497 tp206 | |
498 F0.0 | |
499 s(S'TAT' | |
500 p207 | |
501 S'TTT' | |
502 p208 | |
503 tp209 | |
504 F0.0 | |
505 s(S'AGC' | |
506 p210 | |
507 S'ACC' | |
508 p211 | |
509 tp212 | |
510 F0.0 | |
511 s(g136 | |
512 S'ATA' | |
513 p213 | |
514 tp214 | |
515 F0.0 | |
516 s(S'CCA' | |
517 p215 | |
518 S'CGA' | |
519 p216 | |
520 tp217 | |
521 F0.0 | |
522 s(S'TGC' | |
523 p218 | |
524 S'TAC' | |
525 p219 | |
526 tp220 | |
527 F0.0 | |
528 s(g128 | |
529 S'CCT' | |
530 p221 | |
531 tp222 | |
532 F0.0 | |
533 s(S'ACT' | |
534 p223 | |
535 S'AGT' | |
536 p224 | |
537 tp225 | |
538 F0.0 | |
539 s(S'AGG' | |
540 p226 | |
541 S'ACG' | |
542 p227 | |
543 tp228 | |
544 F0.0 | |
545 s(S'CAC' | |
546 p229 | |
547 S'CCC' | |
548 p230 | |
549 tp231 | |
550 F0.0 | |
551 s(S'TAC' | |
552 p232 | |
553 S'TCC' | |
554 p233 | |
555 tp234 | |
556 F0.0 | |
557 s(g136 | |
558 S'AAA' | |
559 p235 | |
560 tp236 | |
561 F0.0 | |
562 s(S'CTG' | |
563 p237 | |
564 S'CCG' | |
565 p238 | |
566 tp239 | |
567 F0.0 | |
568 s(S'CAA' | |
569 p240 | |
570 S'CCA' | |
571 p241 | |
572 tp242 | |
573 F0.0 | |
574 s(g210 | |
575 S'ATC' | |
576 p243 | |
577 tp244 | |
578 F0.0 | |
579 s(g240 | |
580 S'CGA' | |
581 p245 | |
582 tp246 | |
583 F0.0 | |
584 s(S'AGT' | |
585 p247 | |
586 S'AAT' | |
587 p248 | |
588 tp249 | |
589 F0.0 | |
590 s(S'CAG' | |
591 p250 | |
592 S'CCG' | |
593 p251 | |
594 tp252 | |
595 F0.0 | |
596 s(g122 | |
597 S'TAA' | |
598 p253 | |
599 tp254 | |
600 F0.0 | |
601 s(g169 | |
602 S'ACA' | |
603 p255 | |
604 tp256 | |
605 F0.0 | |
606 s(S'TTC' | |
607 p257 | |
608 S'TCC' | |
609 p258 | |
610 tp259 | |
611 F0.0 | |
612 s(S'CTC' | |
613 p260 | |
614 S'CCC' | |
615 p261 | |
616 tp262 | |
617 F0.0 | |
618 s(g187 | |
619 S'AAC' | |
620 p263 | |
621 tp264 | |
622 F0.0 | |
623 s(g226 | |
624 S'ATG' | |
625 p265 | |
626 tp266 | |
627 F0.0 | |
628 s(S'ATC' | |
629 p267 | |
630 S'AGC' | |
631 p268 | |
632 tp269 | |
633 F0.0 | |
634 s(g175 | |
635 S'GGT' | |
636 p270 | |
637 tp271 | |
638 F0.0 | |
639 s(S'CGA' | |
640 p272 | |
641 S'CCA' | |
642 p273 | |
643 tp274 | |
644 F0.0 | |
645 s(g114 | |
646 S'ATG' | |
647 p275 | |
648 tp276 | |
649 F0.0 | |
650 s(g142 | |
651 S'TGA' | |
652 p277 | |
653 tp278 | |
654 F0.0 | |
655 s(g247 | |
656 S'ACT' | |
657 p279 | |
658 tp280 | |
659 F0.0 | |
660 s(S'GTC' | |
661 p281 | |
662 S'GCC' | |
663 p282 | |
664 tp283 | |
665 F0.0 | |
666 s(S'CGC' | |
667 p284 | |
668 S'CCC' | |
669 p285 | |
670 tp286 | |
671 F0.0 | |
672 s(g184 | |
673 S'CAA' | |
674 p287 | |
675 tp288 | |
676 F0.0 | |
677 s(S'GTT' | |
678 p289 | |
679 S'GCT' | |
680 p290 | |
681 tp291 | |
682 F0.0 | |
683 s(g125 | |
684 S'GGC' | |
685 p292 | |
686 tp293 | |
687 F0.0 | |
688 s(g151 | |
689 S'AAT' | |
690 p294 | |
691 tp295 | |
692 F0.0 | |
693 s(S'TCC' | |
694 p296 | |
695 S'TAC' | |
696 p297 | |
697 tp298 | |
698 F0.0 | |
699 s(g187 | |
700 S'ATC' | |
701 p299 | |
702 tp300 | |
703 F0.0 | |
704 s(g289 | |
705 S'GAT' | |
706 p301 | |
707 tp302 | |
708 F0.0 | |
709 s(g289 | |
710 S'GGT' | |
711 p303 | |
712 tp304 | |
713 F0.0 | |
714 s(g181 | |
715 S'ACA' | |
716 p305 | |
717 tp306 | |
718 F0.0 | |
719 s(g207 | |
720 S'TGT' | |
721 p307 | |
722 tp308 | |
723 F0.0 | |
724 s(S'AAC' | |
725 p309 | |
726 S'ATC' | |
727 p310 | |
728 tp311 | |
729 F0.0 | |
730 s(g198 | |
731 S'ATA' | |
732 p312 | |
733 tp313 | |
734 F0.0 | |
735 s(g148 | |
736 S'GGG' | |
737 p314 | |
738 tp315 | |
739 F0.0 | |
740 s(S'GTG' | |
741 p316 | |
742 S'GCG' | |
743 p317 | |
744 tp318 | |
745 F0.0 | |
746 s(g247 | |
747 S'ATT' | |
748 p319 | |
749 tp320 | |
750 F0.0 | |
751 s(g232 | |
752 S'TGC' | |
753 p321 | |
754 tp322 | |
755 F0.0 | |
756 s(S'TTT' | |
757 p323 | |
758 S'TAT' | |
759 p324 | |
760 tp325 | |
761 F0.0 | |
762 s(g215 | |
763 S'CTA' | |
764 p326 | |
765 tp327 | |
766 F0.0 | |
767 s(S'ATG' | |
768 p328 | |
769 S'AGG' | |
770 p329 | |
771 tp330 | |
772 F0.0 | |
773 s(S'TAG' | |
774 p331 | |
775 S'TCG' | |
776 p332 | |
777 tp333 | |
778 F0.0 | |
779 s(g175 | |
780 S'GTT' | |
781 p334 | |
782 tp335 | |
783 F0.0 | |
784 s(S'TGT' | |
785 p336 | |
786 S'TTT' | |
787 p337 | |
788 tp338 | |
789 F0.0 | |
790 s(g119 | |
791 S'ACG' | |
792 p339 | |
793 tp340 | |
794 F0.0 | |
795 s(g223 | |
796 S'ATT' | |
797 p341 | |
798 tp342 | |
799 F0.0 | |
800 s(g296 | |
801 S'TGC' | |
802 p343 | |
803 tp344 | |
804 F0.0 | |
805 s(g181 | |
806 S'ATA' | |
807 p345 | |
808 tp346 | |
809 F0.0 | |
810 s(g131 | |
811 S'GCC' | |
812 p347 | |
813 tp348 | |
814 F0.0 | |
815 s(S'GCC' | |
816 p349 | |
817 S'GAC' | |
818 p350 | |
819 tp351 | |
820 F0.0 | |
821 s(g267 | |
822 S'AAC' | |
823 p352 | |
824 tp353 | |
825 F0.0 | |
826 s(S'CAT' | |
827 p354 | |
828 S'CTT' | |
829 p355 | |
830 tp356 | |
831 F0.0 | |
832 s(g184 | |
833 S'CCA' | |
834 p357 | |
835 tp358 | |
836 F0.0 | |
837 s(S'TCT' | |
838 p359 | |
839 S'TGT' | |
840 p360 | |
841 tp361 | |
842 F0.0 | |
843 s(S'GGA' | |
844 p362 | |
845 S'GCA' | |
846 p363 | |
847 tp364 | |
848 F0.0 | |
849 s(S'TCG' | |
850 p365 | |
851 S'TGG' | |
852 p366 | |
853 tp367 | |
854 F0.0 | |
855 s(g195 | |
856 S'GAA' | |
857 p368 | |
858 tp369 | |
859 F0.0 | |
860 s(g250 | |
861 S'CTG' | |
862 p370 | |
863 tp371 | |
864 F0.0 | |
865 s(g328 | |
866 S'AAG' | |
867 p372 | |
868 tp373 | |
869 F0.0 | |
870 s(S'CCT' | |
871 p374 | |
872 S'CTT' | |
873 p375 | |
874 tp376 | |
875 F1.0 | |
876 s(g201 | |
877 S'GGA' | |
878 p377 | |
879 tp378 | |
880 F0.0 | |
881 s(S'CCC' | |
882 p379 | |
883 S'CTC' | |
884 p380 | |
885 tp381 | |
886 F0.0 | |
887 s(g362 | |
888 S'GAA' | |
889 p382 | |
890 tp383 | |
891 F0.0 | |
892 s(g125 | |
893 S'GTC' | |
894 p384 | |
895 tp385 | |
896 F0.0 | |
897 s(g105 | |
898 S'TCA' | |
899 p386 | |
900 tp387 | |
901 F0.0 | |
902 s(g323 | |
903 S'TGT' | |
904 p388 | |
905 tp389 | |
906 F0.0 | |
907 s(g379 | |
908 S'CGC' | |
909 p390 | |
910 tp391 | |
911 F0.0 | |
912 s(g267 | |
913 S'ACC' | |
914 p392 | |
915 tp393 | |
916 F0.0 | |
917 s(S'GCT' | |
918 p394 | |
919 S'GGT' | |
920 p395 | |
921 tp396 | |
922 F0.0 | |
923 s(g331 | |
924 S'TGG' | |
925 p397 | |
926 tp398 | |
927 F0.0 | |
928 s(g240 | |
929 S'CTA' | |
930 p399 | |
931 tp400 | |
932 F0.0 | |
933 s(g237 | |
934 S'CAG' | |
935 p401 | |
936 tp402 | |
937 F0.0 | |
938 s(g229 | |
939 S'CTC' | |
940 p403 | |
941 tp404 | |
942 F0.0 | |
943 s(g148 | |
944 S'GTG' | |
945 p405 | |
946 tp406 | |
947 F0.0 | |
948 s(S'GGT' | |
949 p407 | |
950 S'GCT' | |
951 p408 | |
952 tp409 | |
953 F0.0 | |
954 s(g218 | |
955 S'TCC' | |
956 p410 | |
957 tp411 | |
958 F0.0 | |
959 s(g328 | |
960 S'ACG' | |
961 p412 | |
962 tp413 | |
963 F0.0 | |
964 s(g204 | |
965 S'CAG' | |
966 p414 | |
967 tp415 | |
968 F0.0 | |
969 s(g178 | |
970 S'GTG' | |
971 p416 | |
972 tp417 | |
973 F0.0 | |
974 s(S'GCC' | |
975 p418 | |
976 S'GTC' | |
977 p419 | |
978 tp420 | |
979 F1.0 | |
980 s(g207 | |
981 S'TCT' | |
982 p421 | |
983 tp422 | |
984 F0.0 | |
985 s(g359 | |
986 S'TAT' | |
987 p423 | |
988 tp424 | |
989 F0.0 | |
990 s(g394 | |
991 S'GTT' | |
992 p425 | |
993 tp426 | |
994 F0.0 | |
995 s(S'AAT' | |
996 p427 | |
997 S'AGT' | |
998 p428 | |
999 tp429 | |
1000 F0.0 | |
1001 s(g260 | |
1002 S'CAC' | |
1003 p430 | |
1004 tp431 | |
1005 F0.0 | |
1006 s(S'CGG' | |
1007 p432 | |
1008 S'CAG' | |
1009 p433 | |
1010 tp434 | |
1011 F0.0 | |
1012 s(g272 | |
1013 S'CTA' | |
1014 p435 | |
1015 tp436 | |
1016 F0.0 | |
1017 s(g316 | |
1018 S'GGG' | |
1019 p437 | |
1020 tp438 | |
1021 F0.0 | |
1022 s(g169 | |
1023 S'AAA' | |
1024 p439 | |
1025 tp440 | |
1026 F0.0 | |
1027 s(g218 | |
1028 S'TTC' | |
1029 p441 | |
1030 tp442 | |
1031 F0.0 | |
1032 s(g354 | |
1033 S'CCT' | |
1034 p443 | |
1035 tp444 | |
1036 F0.0 | |
1037 s(g284 | |
1038 S'CTC' | |
1039 p445 | |
1040 tp446 | |
1041 F0.0 | |
1042 s(g154 | |
1043 S'CAT' | |
1044 p447 | |
1045 tp448 | |
1046 F0.0 | |
1047 s(g108 | |
1048 S'TAA' | |
1049 p449 | |
1050 tp450 | |
1051 F0.0 | |
1052 s(g365 | |
1053 S'TAG' | |
1054 p451 | |
1055 tp452 | |
1056 F0.0 | |
1057 s(g281 | |
1058 S'GGC' | |
1059 p453 | |
1060 tp454 | |
1061 F0.0 | |
1062 s(g142 | |
1063 S'TTA' | |
1064 p455 | |
1065 tp456 | |
1066 F0.0 | |
1067 s(g119 | |
1068 S'AGG' | |
1069 p457 | |
1070 tp458 | |
1071 F0.0 | |
1072 s(g172 | |
1073 S'TTG' | |
1074 p459 | |
1075 tp460 | |
1076 F0.0 | |
1077 s(g336 | |
1078 S'TAT' | |
1079 p461 | |
1080 tp462 | |
1081 F0.0 | |
1082 s(g323 | |
1083 S'TCT' | |
1084 p463 | |
1085 tp464 | |
1086 F0.0 | |
1087 s(g359 | |
1088 S'TTT' | |
1089 p465 | |
1090 tp466 | |
1091 F0.0 | |
1092 s(g394 | |
1093 S'GAT' | |
1094 p467 | |
1095 tp468 | |
1096 F0.0 | |
1097 s(g215 | |
1098 S'CAA' | |
1099 p469 | |
1100 tp470 | |
1101 F0.0 | |
1102 s(g229 | |
1103 S'CGC' | |
1104 p471 | |
1105 tp472 | |
1106 F0.0 | |
1107 s(g365 | |
1108 S'TTG' | |
1109 p473 | |
1110 tp474 | |
1111 F0.0 | |
1112 s(g151 | |
1113 S'ACT' | |
1114 p475 | |
1115 tp476 | |
1116 F0.0 | |
1117 s(g128 | |
1118 S'CAT' | |
1119 p477 | |
1120 tp478 | |
1121 F0.0 | |
1122 s(g223 | |
1123 S'AAT' | |
1124 p479 | |
1125 tp480 | |
1126 F0.0 | |
1127 s(g154 | |
1128 S'CCT' | |
1129 p481 | |
1130 tp482 | |
1131 F0.0 | |
1132 s(S'AGC' | |
1133 p483 | |
1134 S'AAC' | |
1135 p484 | |
1136 tp485 | |
1137 F1.0 | |
1138 s(g166 | |
1139 S'TGG' | |
1140 p486 | |
1141 tp487 | |
1142 F0.0 | |
1143 s(g145 | |
1144 S'CGT' | |
1145 p488 | |
1146 tp489 | |
1147 F0.0 | |
1148 s(g281 | |
1149 S'GAC' | |
1150 p490 | |
1151 tp491 | |
1152 F0.0 | |
1153 s(g250 | |
1154 S'CGG' | |
1155 p492 | |
1156 tp493 | |
1157 F0.0 | |
1158 s(g296 | |
1159 S'TTC' | |
1160 p494 | |
1161 tp495 | |
1162 F0.0 | |
1163 s(g427 | |
1164 S'ACT' | |
1165 p496 | |
1166 tp497 | |
1167 F0.0 | |
1168 s(g105 | |
1169 S'TGA' | |
1170 p498 | |
1171 tp499 | |
1172 F0.0 | |
1173 s(g379 | |
1174 S'CAC' | |
1175 p500 | |
1176 tp501 | |
1177 F0.0 | |
1178 s(g195 | |
1179 S'GGA' | |
1180 p502 | |
1181 tp503 | |
1182 F0.0 | |
1183 s(g172 | |
1184 S'TAG' | |
1185 p504 | |
1186 tp505 | |
1187 F0.0 | |
1188 s(g331 | |
1189 S'TTG' | |
1190 p506 | |
1191 tp507 | |
1192 F0.0 | |
1193 s(S'AGG' | |
1194 p508 | |
1195 S'AAG' | |
1196 p509 | |
1197 tp510 | |
1198 F1.0 | |
1199 s(g257 | |
1200 S'TGC' | |
1201 p511 | |
1202 tp512 | |
1203 F0.0 | |
1204 s(g432 | |
1205 S'CCG' | |
1206 p513 | |
1207 tp514 | |
1208 F0.0 | |
1209 s(g316 | |
1210 S'GAG' | |
1211 p515 | |
1212 tp516 | |
1213 F0.0 | |
1214 s(g309 | |
1215 S'ACC' | |
1216 p517 | |
1217 tp518 | |
1218 F0.0 | |
1219 s(g237 | |
1220 S'CGG' | |
1221 p519 | |
1222 tp520 | |
1223 F0.0 | |
1224 s(g122 | |
1225 S'TTA' | |
1226 p521 | |
1227 tp522 | |
1228 F0.0 | |
1229 s(g362 | |
1230 S'GTA' | |
1231 p523 | |
1232 tp524 | |
1233 F0.0 | |
1234 s(g114 | |
1235 S'AAG' | |
1236 p525 | |
1237 tp526 | |
1238 F0.0 | |
1239 s(g407 | |
1240 S'GAT' | |
1241 p527 | |
1242 tp528 | |
1243 F0.0 | |
1244 s(g232 | |
1245 S'TTC' | |
1246 p529 | |
1247 tp530 | |
1248 F0.0 | |
1249 s(g166 | |
1250 S'TAG' | |
1251 p531 | |
1252 tp532 | |
1253 F0.0 | |
1254 s(g427 | |
1255 S'ATT' | |
1256 p533 | |
1257 tp534 | |
1258 F0.0 | |
1259 s(g349 | |
1260 S'GGC' | |
1261 p535 | |
1262 tp536 | |
1263 F0.0 | |
1264 s(g260 | |
1265 S'CGC' | |
1266 p537 | |
1267 tp538 | |
1268 F0.0 | |
1269 s(g432 | |
1270 S'CTG' | |
1271 p539 | |
1272 tp540 | |
1273 F0.0 | |
1274 s(g336 | |
1275 S'TCT' | |
1276 p541 | |
1277 tp542 | |
1278 F0.0 | |
1279 s(g198 | |
1280 S'AAA' | |
1281 p543 | |
1282 tp544 | |
1283 F0.0 | |
1284 s(g284 | |
1285 S'CAC' | |
1286 p545 | |
1287 tp546 | |
1288 F0.0 | |
1289 s(g407 | |
1290 S'GTT' | |
1291 p547 | |
1292 tp548 | |
1293 F0.0 | |
1294 s(g257 | |
1295 S'TAC' | |
1296 p549 | |
1297 tp550 | |
1298 F0.0 | |
1299 s(g178 | |
1300 S'GCG' | |
1301 p551 | |
1302 tp552 | |
1303 F0.0 | |
1304 s(g201 | |
1305 S'GAA' | |
1306 p553 | |
1307 tp554 | |
1308 F0.0 | |
1309 s(g204 | |
1310 S'CTG' | |
1311 p555 | |
1312 tp556 | |
1313 F0.0 | |
1314 s(g272 | |
1315 S'CAA' | |
1316 p557 | |
1317 tp558 | |
1318 F0.0 | |
1319 ssS'AVG_MUT_RATE' | |
1320 p559 | |
1321 F0.0009251916468411313 | |
1322 sS'INDEL_FREQ' | |
1323 p560 | |
1324 (dp561 | |
1325 I1 | |
1326 F0.9999999999999997 | |
1327 ss. |