Mercurial > repos > thondeboer > neat_genreads
comparison test-data/chrMT-PE-VCF-BAM-genMutModel.p @ 0:6e75a84e9338 draft
planemo upload commit e96b43f96afce6a7b7dfd4499933aad7d05c955e-dirty
author | thondeboer |
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date | Tue, 15 May 2018 02:39:53 -0400 |
parents | |
children |
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-1:000000000000 | 0:6e75a84e9338 |
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1 (dp0 | |
2 S'HIGH_MUT_REGIONS' | |
3 p1 | |
4 (lp2 | |
5 (S'chrMT' | |
6 p3 | |
7 I2000 | |
8 I16000 | |
9 F0.0010714285714285715 | |
10 tp4 | |
11 asS'COMMON_VARIANTS' | |
12 p5 | |
13 (lp6 | |
14 (g3 | |
15 I4077 | |
16 S'T' | |
17 p7 | |
18 S'C' | |
19 p8 | |
20 F1e-05 | |
21 tp9 | |
22 a(g3 | |
23 I4681 | |
24 S'A' | |
25 p10 | |
26 S'G' | |
27 p11 | |
28 F1e-05 | |
29 tp12 | |
30 a(g3 | |
31 I5712 | |
32 S'C' | |
33 p13 | |
34 S'T' | |
35 p14 | |
36 F1e-05 | |
37 tp15 | |
38 a(g3 | |
39 I6502 | |
40 S'A' | |
41 p16 | |
42 S'G' | |
43 p17 | |
44 F1e-05 | |
45 tp18 | |
46 a(g3 | |
47 I7424 | |
48 S'C' | |
49 p19 | |
50 S'T' | |
51 p20 | |
52 F1e-05 | |
53 tp21 | |
54 a(g3 | |
55 I7777 | |
56 S'T' | |
57 p22 | |
58 S'C' | |
59 p23 | |
60 F1e-05 | |
61 tp24 | |
62 a(g3 | |
63 I8470 | |
64 S'C' | |
65 p25 | |
66 S'T' | |
67 p26 | |
68 F1e-05 | |
69 tp27 | |
70 a(g3 | |
71 I8775 | |
72 S'C' | |
73 p28 | |
74 S'T' | |
75 p29 | |
76 F1e-05 | |
77 tp30 | |
78 a(g3 | |
79 I10749 | |
80 S'A' | |
81 p31 | |
82 S'G' | |
83 p32 | |
84 F1e-05 | |
85 tp33 | |
86 a(g3 | |
87 I11272 | |
88 S'G' | |
89 p34 | |
90 S'A' | |
91 p35 | |
92 F1e-05 | |
93 tp36 | |
94 a(g3 | |
95 I11742 | |
96 S'C' | |
97 p37 | |
98 S'T' | |
99 p38 | |
100 F1e-05 | |
101 tp39 | |
102 a(g3 | |
103 I13131 | |
104 S'-' | |
105 p40 | |
106 S'T' | |
107 p41 | |
108 F1e-05 | |
109 tp42 | |
110 a(g3 | |
111 I13272 | |
112 S'A' | |
113 p43 | |
114 S'G' | |
115 p44 | |
116 F1e-05 | |
117 tp45 | |
118 a(g3 | |
119 I13803 | |
120 S'G' | |
121 p46 | |
122 S'A' | |
123 p47 | |
124 F1e-05 | |
125 tp48 | |
126 a(g3 | |
127 I14066 | |
128 S'C' | |
129 p49 | |
130 S'T' | |
131 p50 | |
132 F1e-05 | |
133 tp51 | |
134 asS'SNP_TRANS_FREQ' | |
135 p52 | |
136 (dp53 | |
137 (S'A' | |
138 p54 | |
139 S'G' | |
140 p55 | |
141 tp56 | |
142 F1.0 | |
143 s(S'C' | |
144 p57 | |
145 g41 | |
146 tp58 | |
147 F1.0 | |
148 s(g41 | |
149 g57 | |
150 tp59 | |
151 F1.0 | |
152 s(g55 | |
153 g54 | |
154 tp60 | |
155 F1.0 | |
156 ssS'SNP_FREQ' | |
157 p61 | |
158 F0.9333333333333333 | |
159 sS'TRINUC_MUT_PROB' | |
160 p62 | |
161 (dp63 | |
162 S'ACC' | |
163 p64 | |
164 F0.003883495145631068 | |
165 sS'ATG' | |
166 p65 | |
167 F0.0 | |
168 sS'AAG' | |
169 p66 | |
170 F0.0 | |
171 sS'AAA' | |
172 p67 | |
173 F0.0 | |
174 sS'ATC' | |
175 p68 | |
176 F0.0 | |
177 sS'AAC' | |
178 p69 | |
179 F0.00202020202020202 | |
180 sS'ATA' | |
181 p70 | |
182 F0.0027247956403269754 | |
183 sS'AGG' | |
184 p71 | |
185 F0.005747126436781609 | |
186 sS'CCT' | |
187 p72 | |
188 F0.0036900369003690036 | |
189 sS'CTC' | |
190 p73 | |
191 F0.0 | |
192 sS'AGC' | |
193 p74 | |
194 F0.0035460992907801418 | |
195 sS'ACA' | |
196 p75 | |
197 F0.0 | |
198 sS'AGA' | |
199 p76 | |
200 F0.0 | |
201 sS'CAT' | |
202 p77 | |
203 F0.002403846153846154 | |
204 sS'AAT' | |
205 p78 | |
206 F0.0 | |
207 sS'ATT' | |
208 p79 | |
209 F0.0 | |
210 sS'CTG' | |
211 p80 | |
212 F0.005555555555555556 | |
213 sS'CTA' | |
214 p81 | |
215 F0.0 | |
216 sS'ACT' | |
217 p82 | |
218 F0.0 | |
219 sS'CAC' | |
220 p83 | |
221 F0.0 | |
222 sS'ACG' | |
223 p84 | |
224 F0.0 | |
225 sS'CAA' | |
226 p85 | |
227 F0.0 | |
228 sS'AGT' | |
229 p86 | |
230 F0.0 | |
231 sS'CCA' | |
232 p87 | |
233 F0.0 | |
234 sS'CCG' | |
235 p88 | |
236 F0.0 | |
237 sS'CCC' | |
238 p89 | |
239 F0.0 | |
240 sS'TAT' | |
241 p90 | |
242 F0.0 | |
243 sS'GGT' | |
244 p91 | |
245 F0.0 | |
246 sS'TGT' | |
247 p92 | |
248 F0.0 | |
249 sS'CGA' | |
250 p93 | |
251 F0.0 | |
252 sS'CAG' | |
253 p94 | |
254 F0.005025125628140704 | |
255 sS'CGC' | |
256 p95 | |
257 F0.0 | |
258 sS'GAT' | |
259 p96 | |
260 F0.0 | |
261 sS'CGG' | |
262 p97 | |
263 F0.0 | |
264 sS'CTT' | |
265 p98 | |
266 F0.0 | |
267 sS'TGC' | |
268 p99 | |
269 F0.0 | |
270 sS'GGG' | |
271 p100 | |
272 F0.0 | |
273 sS'TAG' | |
274 p101 | |
275 F0.0 | |
276 sS'GGA' | |
277 p102 | |
278 F0.0 | |
279 sS'TAA' | |
280 p103 | |
281 F0.0024154589371980675 | |
282 sS'GGC' | |
283 p104 | |
284 F0.0 | |
285 sS'TAC' | |
286 p105 | |
287 F0.0 | |
288 sS'GAG' | |
289 p106 | |
290 F0.0 | |
291 sS'TCG' | |
292 p107 | |
293 F0.0 | |
294 sS'TTA' | |
295 p108 | |
296 F0.0 | |
297 sS'TTT' | |
298 p109 | |
299 F0.0 | |
300 sS'GAC' | |
301 p110 | |
302 F0.0 | |
303 sS'CGT' | |
304 p111 | |
305 F0.0 | |
306 sS'GAA' | |
307 p112 | |
308 F0.0 | |
309 sS'TCA' | |
310 p113 | |
311 F0.0024096385542168677 | |
312 sS'GCA' | |
313 p114 | |
314 F0.0 | |
315 sS'GTA' | |
316 p115 | |
317 F0.0 | |
318 sS'GCC' | |
319 p116 | |
320 F0.0036900369003690036 | |
321 sS'GTC' | |
322 p117 | |
323 F0.0 | |
324 sS'GCG' | |
325 p118 | |
326 F0.0 | |
327 sS'GTG' | |
328 p119 | |
329 F0.0 | |
330 sS'TTC' | |
331 p120 | |
332 F0.0 | |
333 sS'GTT' | |
334 p121 | |
335 F0.0 | |
336 sS'GCT' | |
337 p122 | |
338 F0.0 | |
339 sS'TGA' | |
340 p123 | |
341 F0.0 | |
342 sS'TTG' | |
343 p124 | |
344 F0.0 | |
345 sS'TCC' | |
346 p125 | |
347 F0.0 | |
348 sS'TGG' | |
349 p126 | |
350 F0.0 | |
351 sS'TCT' | |
352 p127 | |
353 F0.0 | |
354 ssS'TRINUC_TRANS_PROBS' | |
355 p128 | |
356 (dp129 | |
357 (S'TTA' | |
358 p130 | |
359 S'TAA' | |
360 p131 | |
361 tp132 | |
362 F0.0 | |
363 s(S'TGA' | |
364 p133 | |
365 S'TCA' | |
366 p134 | |
367 tp135 | |
368 F0.0 | |
369 s(S'GAA' | |
370 p136 | |
371 S'GCA' | |
372 p137 | |
373 tp138 | |
374 F0.0 | |
375 s(S'ACG' | |
376 p139 | |
377 S'AGG' | |
378 p140 | |
379 tp141 | |
380 F0.0 | |
381 s(g133 | |
382 S'TTA' | |
383 p142 | |
384 tp143 | |
385 F0.0 | |
386 s(S'AAG' | |
387 p144 | |
388 S'ATG' | |
389 p145 | |
390 tp146 | |
391 F0.0 | |
392 s(S'TCA' | |
393 p147 | |
394 S'TGA' | |
395 p148 | |
396 tp149 | |
397 F0.0 | |
398 s(S'GAC' | |
399 p150 | |
400 S'GCC' | |
401 p151 | |
402 tp152 | |
403 F0.0 | |
404 s(S'CTT' | |
405 p153 | |
406 S'CGT' | |
407 p154 | |
408 tp155 | |
409 F0.0 | |
410 s(S'GGC' | |
411 p156 | |
412 S'GTC' | |
413 p157 | |
414 tp158 | |
415 F0.0 | |
416 s(g136 | |
417 S'GTA' | |
418 p159 | |
419 tp160 | |
420 F0.0 | |
421 s(S'AAT' | |
422 p161 | |
423 S'AGT' | |
424 p162 | |
425 tp163 | |
426 F0.0 | |
427 s(S'GCG' | |
428 p164 | |
429 S'GTG' | |
430 p165 | |
431 tp166 | |
432 F0.0 | |
433 s(S'TAA' | |
434 p167 | |
435 S'TCA' | |
436 p168 | |
437 tp169 | |
438 F0.0 | |
439 s(S'CCT' | |
440 p170 | |
441 S'CAT' | |
442 p171 | |
443 tp172 | |
444 F0.0 | |
445 s(S'GAG' | |
446 p173 | |
447 S'GCG' | |
448 p174 | |
449 tp175 | |
450 F0.0 | |
451 s(S'ATT' | |
452 p176 | |
453 S'AGT' | |
454 p177 | |
455 tp178 | |
456 F0.0 | |
457 s(S'CGT' | |
458 p179 | |
459 S'CTT' | |
460 p180 | |
461 tp181 | |
462 F0.0 | |
463 s(S'CAT' | |
464 p182 | |
465 S'CGT' | |
466 p183 | |
467 tp184 | |
468 F1.0 | |
469 s(g164 | |
470 S'GAG' | |
471 p185 | |
472 tp186 | |
473 F0.0 | |
474 s(g136 | |
475 S'GGA' | |
476 p187 | |
477 tp188 | |
478 F0.0 | |
479 s(g156 | |
480 S'GAC' | |
481 p189 | |
482 tp190 | |
483 F0.0 | |
484 s(S'TTG' | |
485 p191 | |
486 S'TCG' | |
487 p192 | |
488 tp193 | |
489 F0.0 | |
490 s(S'ATA' | |
491 p194 | |
492 S'AGA' | |
493 p195 | |
494 tp196 | |
495 F0.0 | |
496 s(S'TGG' | |
497 p197 | |
498 S'TCG' | |
499 p198 | |
500 tp199 | |
501 F0.0 | |
502 s(S'GAT' | |
503 p200 | |
504 S'GCT' | |
505 p201 | |
506 tp202 | |
507 F0.0 | |
508 s(S'GGG' | |
509 p203 | |
510 S'GAG' | |
511 p204 | |
512 tp205 | |
513 F0.0 | |
514 s(S'AAA' | |
515 p206 | |
516 S'AGA' | |
517 p207 | |
518 tp208 | |
519 F0.0 | |
520 s(S'TCA' | |
521 p209 | |
522 S'TTA' | |
523 p210 | |
524 tp211 | |
525 F1.0 | |
526 s(S'ACC' | |
527 p212 | |
528 S'AGC' | |
529 p213 | |
530 tp214 | |
531 F0.0 | |
532 s(g164 | |
533 S'GGG' | |
534 p215 | |
535 tp216 | |
536 F0.0 | |
537 s(S'AAC' | |
538 p217 | |
539 S'AGC' | |
540 p218 | |
541 tp219 | |
542 F1.0 | |
543 s(S'GTA' | |
544 p220 | |
545 S'GCA' | |
546 p221 | |
547 tp222 | |
548 F0.0 | |
549 s(S'ACA' | |
550 p223 | |
551 S'AGA' | |
552 p224 | |
553 tp225 | |
554 F0.0 | |
555 s(S'GCA' | |
556 p226 | |
557 S'GTA' | |
558 p227 | |
559 tp228 | |
560 F0.0 | |
561 s(S'CCG' | |
562 p229 | |
563 S'CGG' | |
564 p230 | |
565 tp231 | |
566 F0.0 | |
567 s(S'TAT' | |
568 p232 | |
569 S'TTT' | |
570 p233 | |
571 tp234 | |
572 F0.0 | |
573 s(S'AGC' | |
574 p235 | |
575 S'ACC' | |
576 p236 | |
577 tp237 | |
578 F0.0 | |
579 s(S'AGA' | |
580 p238 | |
581 S'ATA' | |
582 p239 | |
583 tp240 | |
584 F0.0 | |
585 s(S'CCA' | |
586 p241 | |
587 S'CGA' | |
588 p242 | |
589 tp243 | |
590 F0.0 | |
591 s(S'TGC' | |
592 p244 | |
593 S'TAC' | |
594 p245 | |
595 tp246 | |
596 F0.0 | |
597 s(g153 | |
598 S'CCT' | |
599 p247 | |
600 tp248 | |
601 F0.0 | |
602 s(S'ACT' | |
603 p249 | |
604 S'AGT' | |
605 p250 | |
606 tp251 | |
607 F0.0 | |
608 s(S'AGG' | |
609 p252 | |
610 S'ACG' | |
611 p253 | |
612 tp254 | |
613 F0.0 | |
614 s(S'CAC' | |
615 p255 | |
616 S'CCC' | |
617 p256 | |
618 tp257 | |
619 F0.0 | |
620 s(S'TAC' | |
621 p258 | |
622 S'TCC' | |
623 p259 | |
624 tp260 | |
625 F0.0 | |
626 s(g238 | |
627 S'AAA' | |
628 p261 | |
629 tp262 | |
630 F0.0 | |
631 s(S'CTG' | |
632 p263 | |
633 S'CCG' | |
634 p264 | |
635 tp265 | |
636 F1.0 | |
637 s(S'CAA' | |
638 p266 | |
639 S'CCA' | |
640 p267 | |
641 tp268 | |
642 F0.0 | |
643 s(g235 | |
644 S'ATC' | |
645 p269 | |
646 tp270 | |
647 F0.0 | |
648 s(g266 | |
649 S'CGA' | |
650 p271 | |
651 tp272 | |
652 F0.0 | |
653 s(S'AGT' | |
654 p273 | |
655 S'AAT' | |
656 p274 | |
657 tp275 | |
658 F0.0 | |
659 s(S'CAG' | |
660 p276 | |
661 S'CCG' | |
662 p277 | |
663 tp278 | |
664 F0.0 | |
665 s(g147 | |
666 S'TAA' | |
667 p279 | |
668 tp280 | |
669 F0.0 | |
670 s(S'ATA' | |
671 p281 | |
672 S'ACA' | |
673 p282 | |
674 tp283 | |
675 F1.0 | |
676 s(S'TTC' | |
677 p284 | |
678 S'TCC' | |
679 p285 | |
680 tp286 | |
681 F0.0 | |
682 s(S'CTC' | |
683 p287 | |
684 S'CCC' | |
685 p288 | |
686 tp289 | |
687 F0.0 | |
688 s(g212 | |
689 S'AAC' | |
690 p290 | |
691 tp291 | |
692 F0.0 | |
693 s(g252 | |
694 S'ATG' | |
695 p292 | |
696 tp293 | |
697 F0.0 | |
698 s(S'ATC' | |
699 p294 | |
700 S'AGC' | |
701 p295 | |
702 tp296 | |
703 F0.0 | |
704 s(g200 | |
705 S'GGT' | |
706 p297 | |
707 tp298 | |
708 F0.0 | |
709 s(S'CGA' | |
710 p299 | |
711 S'CCA' | |
712 p300 | |
713 tp301 | |
714 F0.0 | |
715 s(g139 | |
716 S'ATG' | |
717 p302 | |
718 tp303 | |
719 F0.0 | |
720 s(S'TAA' | |
721 p304 | |
722 S'TGA' | |
723 p305 | |
724 tp306 | |
725 F1.0 | |
726 s(g273 | |
727 S'ACT' | |
728 p307 | |
729 tp308 | |
730 F0.0 | |
731 s(S'GTC' | |
732 p309 | |
733 S'GCC' | |
734 p310 | |
735 tp311 | |
736 F0.0 | |
737 s(S'CGC' | |
738 p312 | |
739 S'CCC' | |
740 p313 | |
741 tp314 | |
742 F0.0 | |
743 s(S'CTA' | |
744 p315 | |
745 S'CAA' | |
746 p316 | |
747 tp317 | |
748 F0.0 | |
749 s(S'GTT' | |
750 p318 | |
751 S'GCT' | |
752 p319 | |
753 tp320 | |
754 F0.0 | |
755 s(g150 | |
756 S'GGC' | |
757 p321 | |
758 tp322 | |
759 F0.0 | |
760 s(g176 | |
761 S'AAT' | |
762 p323 | |
763 tp324 | |
764 F0.0 | |
765 s(S'TCC' | |
766 p325 | |
767 S'TAC' | |
768 p326 | |
769 tp327 | |
770 F0.0 | |
771 s(S'ACC' | |
772 p328 | |
773 S'ATC' | |
774 p329 | |
775 tp330 | |
776 F1.0 | |
777 s(g318 | |
778 S'GAT' | |
779 p331 | |
780 tp332 | |
781 F0.0 | |
782 s(g318 | |
783 S'GGT' | |
784 p333 | |
785 tp334 | |
786 F0.0 | |
787 s(g206 | |
788 S'ACA' | |
789 p335 | |
790 tp336 | |
791 F0.0 | |
792 s(g232 | |
793 S'TGT' | |
794 p337 | |
795 tp338 | |
796 F0.0 | |
797 s(S'AAC' | |
798 p339 | |
799 S'ATC' | |
800 p340 | |
801 tp341 | |
802 F0.0 | |
803 s(g223 | |
804 S'ATA' | |
805 p342 | |
806 tp343 | |
807 F0.0 | |
808 s(g173 | |
809 S'GGG' | |
810 p344 | |
811 tp345 | |
812 F0.0 | |
813 s(S'GTG' | |
814 p346 | |
815 S'GCG' | |
816 p347 | |
817 tp348 | |
818 F0.0 | |
819 s(g273 | |
820 S'ATT' | |
821 p349 | |
822 tp350 | |
823 F0.0 | |
824 s(g258 | |
825 S'TGC' | |
826 p351 | |
827 tp352 | |
828 F0.0 | |
829 s(S'TTT' | |
830 p353 | |
831 S'TAT' | |
832 p354 | |
833 tp355 | |
834 F0.0 | |
835 s(g241 | |
836 S'CTA' | |
837 p356 | |
838 tp357 | |
839 F0.0 | |
840 s(S'ATG' | |
841 p358 | |
842 S'AGG' | |
843 p359 | |
844 tp360 | |
845 F0.0 | |
846 s(S'TAG' | |
847 p361 | |
848 S'TCG' | |
849 p362 | |
850 tp363 | |
851 F0.0 | |
852 s(g200 | |
853 S'GTT' | |
854 p364 | |
855 tp365 | |
856 F0.0 | |
857 s(S'TGT' | |
858 p366 | |
859 S'TTT' | |
860 p367 | |
861 tp368 | |
862 F0.0 | |
863 s(g223 | |
864 S'AAA' | |
865 p369 | |
866 tp370 | |
867 F0.0 | |
868 s(g249 | |
869 S'ATT' | |
870 p371 | |
871 tp372 | |
872 F0.0 | |
873 s(g325 | |
874 S'TGC' | |
875 p373 | |
876 tp374 | |
877 F0.0 | |
878 s(g206 | |
879 S'ATA' | |
880 p375 | |
881 tp376 | |
882 F0.0 | |
883 s(g156 | |
884 S'GCC' | |
885 p377 | |
886 tp378 | |
887 F0.0 | |
888 s(S'GCC' | |
889 p379 | |
890 S'GAC' | |
891 p380 | |
892 tp381 | |
893 F0.0 | |
894 s(g294 | |
895 S'AAC' | |
896 p382 | |
897 tp383 | |
898 F0.0 | |
899 s(S'CAT' | |
900 p384 | |
901 S'CTT' | |
902 p385 | |
903 tp386 | |
904 F0.0 | |
905 s(g315 | |
906 S'CCA' | |
907 p387 | |
908 tp388 | |
909 F0.0 | |
910 s(S'TCT' | |
911 p389 | |
912 S'TGT' | |
913 p390 | |
914 tp391 | |
915 F0.0 | |
916 s(S'GGA' | |
917 p392 | |
918 S'GCA' | |
919 p393 | |
920 tp394 | |
921 F0.0 | |
922 s(S'TCG' | |
923 p395 | |
924 S'TGG' | |
925 p396 | |
926 tp397 | |
927 F0.0 | |
928 s(g220 | |
929 S'GAA' | |
930 p398 | |
931 tp399 | |
932 F0.0 | |
933 s(g276 | |
934 S'CTG' | |
935 p400 | |
936 tp401 | |
937 F0.0 | |
938 s(g358 | |
939 S'AAG' | |
940 p402 | |
941 tp403 | |
942 F0.0 | |
943 s(S'CCT' | |
944 p404 | |
945 S'CTT' | |
946 p405 | |
947 tp406 | |
948 F1.0 | |
949 s(g226 | |
950 S'GGA' | |
951 p407 | |
952 tp408 | |
953 F0.0 | |
954 s(S'CCC' | |
955 p409 | |
956 S'CTC' | |
957 p410 | |
958 tp411 | |
959 F0.0 | |
960 s(g392 | |
961 S'GAA' | |
962 p412 | |
963 tp413 | |
964 F0.0 | |
965 s(g150 | |
966 S'GTC' | |
967 p414 | |
968 tp415 | |
969 F0.0 | |
970 s(g130 | |
971 S'TCA' | |
972 p416 | |
973 tp417 | |
974 F0.0 | |
975 s(g353 | |
976 S'TGT' | |
977 p418 | |
978 tp419 | |
979 F0.0 | |
980 s(g409 | |
981 S'CGC' | |
982 p420 | |
983 tp421 | |
984 F0.0 | |
985 s(g294 | |
986 S'ACC' | |
987 p422 | |
988 tp423 | |
989 F0.0 | |
990 s(S'GCT' | |
991 p424 | |
992 S'GGT' | |
993 p425 | |
994 tp426 | |
995 F0.0 | |
996 s(g361 | |
997 S'TGG' | |
998 p427 | |
999 tp428 | |
1000 F0.0 | |
1001 s(g266 | |
1002 S'CTA' | |
1003 p429 | |
1004 tp430 | |
1005 F0.0 | |
1006 s(S'CTG' | |
1007 p431 | |
1008 S'CAG' | |
1009 p432 | |
1010 tp433 | |
1011 F0.0 | |
1012 s(g255 | |
1013 S'CTC' | |
1014 p434 | |
1015 tp435 | |
1016 F0.0 | |
1017 s(g173 | |
1018 S'GTG' | |
1019 p436 | |
1020 tp437 | |
1021 F0.0 | |
1022 s(S'GGT' | |
1023 p438 | |
1024 S'GCT' | |
1025 p439 | |
1026 tp440 | |
1027 F0.0 | |
1028 s(g244 | |
1029 S'TCC' | |
1030 p441 | |
1031 tp442 | |
1032 F0.0 | |
1033 s(g358 | |
1034 S'ACG' | |
1035 p443 | |
1036 tp444 | |
1037 F0.0 | |
1038 s(g229 | |
1039 S'CAG' | |
1040 p445 | |
1041 tp446 | |
1042 F0.0 | |
1043 s(g203 | |
1044 S'GTG' | |
1045 p447 | |
1046 tp448 | |
1047 F0.0 | |
1048 s(S'GCC' | |
1049 p449 | |
1050 S'GTC' | |
1051 p450 | |
1052 tp451 | |
1053 F1.0 | |
1054 s(g232 | |
1055 S'TCT' | |
1056 p452 | |
1057 tp453 | |
1058 F0.0 | |
1059 s(g389 | |
1060 S'TAT' | |
1061 p454 | |
1062 tp455 | |
1063 F0.0 | |
1064 s(g424 | |
1065 S'GTT' | |
1066 p456 | |
1067 tp457 | |
1068 F0.0 | |
1069 s(g238 | |
1070 S'ACA' | |
1071 p458 | |
1072 tp459 | |
1073 F0.0 | |
1074 s(g287 | |
1075 S'CAC' | |
1076 p460 | |
1077 tp461 | |
1078 F0.0 | |
1079 s(S'CGG' | |
1080 p462 | |
1081 S'CAG' | |
1082 p463 | |
1083 tp464 | |
1084 F0.0 | |
1085 s(g299 | |
1086 S'CTA' | |
1087 p465 | |
1088 tp466 | |
1089 F0.0 | |
1090 s(g346 | |
1091 S'GGG' | |
1092 p467 | |
1093 tp468 | |
1094 F0.0 | |
1095 s(g194 | |
1096 S'AAA' | |
1097 p469 | |
1098 tp470 | |
1099 F0.0 | |
1100 s(g244 | |
1101 S'TTC' | |
1102 p471 | |
1103 tp472 | |
1104 F0.0 | |
1105 s(g384 | |
1106 S'CCT' | |
1107 p473 | |
1108 tp474 | |
1109 F0.0 | |
1110 s(g312 | |
1111 S'CTC' | |
1112 p475 | |
1113 tp476 | |
1114 F0.0 | |
1115 s(g179 | |
1116 S'CAT' | |
1117 p477 | |
1118 tp478 | |
1119 F0.0 | |
1120 s(g133 | |
1121 S'TAA' | |
1122 p479 | |
1123 tp480 | |
1124 F0.0 | |
1125 s(g395 | |
1126 S'TAG' | |
1127 p481 | |
1128 tp482 | |
1129 F0.0 | |
1130 s(g309 | |
1131 S'GGC' | |
1132 p483 | |
1133 tp484 | |
1134 F0.0 | |
1135 s(g167 | |
1136 S'TTA' | |
1137 p485 | |
1138 tp486 | |
1139 F0.0 | |
1140 s(g144 | |
1141 S'AGG' | |
1142 p487 | |
1143 tp488 | |
1144 F0.0 | |
1145 s(g197 | |
1146 S'TTG' | |
1147 p489 | |
1148 tp490 | |
1149 F0.0 | |
1150 s(g366 | |
1151 S'TAT' | |
1152 p491 | |
1153 tp492 | |
1154 F0.0 | |
1155 s(g353 | |
1156 S'TCT' | |
1157 p493 | |
1158 tp494 | |
1159 F0.0 | |
1160 s(g389 | |
1161 S'TTT' | |
1162 p495 | |
1163 tp496 | |
1164 F0.0 | |
1165 s(g424 | |
1166 S'GAT' | |
1167 p497 | |
1168 tp498 | |
1169 F0.0 | |
1170 s(g241 | |
1171 S'CAA' | |
1172 p499 | |
1173 tp500 | |
1174 F0.0 | |
1175 s(g255 | |
1176 S'CGC' | |
1177 p501 | |
1178 tp502 | |
1179 F0.0 | |
1180 s(g395 | |
1181 S'TTG' | |
1182 p503 | |
1183 tp504 | |
1184 F0.0 | |
1185 s(g176 | |
1186 S'ACT' | |
1187 p505 | |
1188 tp506 | |
1189 F0.0 | |
1190 s(g153 | |
1191 S'CAT' | |
1192 p507 | |
1193 tp508 | |
1194 F0.0 | |
1195 s(g249 | |
1196 S'AAT' | |
1197 p509 | |
1198 tp510 | |
1199 F0.0 | |
1200 s(g179 | |
1201 S'CCT' | |
1202 p511 | |
1203 tp512 | |
1204 F0.0 | |
1205 s(S'AGC' | |
1206 p513 | |
1207 S'AAC' | |
1208 p514 | |
1209 tp515 | |
1210 F1.0 | |
1211 s(g191 | |
1212 S'TGG' | |
1213 p516 | |
1214 tp517 | |
1215 F0.0 | |
1216 s(g170 | |
1217 S'CGT' | |
1218 p518 | |
1219 tp519 | |
1220 F0.0 | |
1221 s(g309 | |
1222 S'GAC' | |
1223 p520 | |
1224 tp521 | |
1225 F0.0 | |
1226 s(S'CAG' | |
1227 p522 | |
1228 S'CGG' | |
1229 p523 | |
1230 tp524 | |
1231 F1.0 | |
1232 s(g325 | |
1233 S'TTC' | |
1234 p525 | |
1235 tp526 | |
1236 F0.0 | |
1237 s(g161 | |
1238 S'ACT' | |
1239 p527 | |
1240 tp528 | |
1241 F0.0 | |
1242 s(g130 | |
1243 S'TGA' | |
1244 p529 | |
1245 tp530 | |
1246 F0.0 | |
1247 s(g409 | |
1248 S'CAC' | |
1249 p531 | |
1250 tp532 | |
1251 F0.0 | |
1252 s(g220 | |
1253 S'GGA' | |
1254 p533 | |
1255 tp534 | |
1256 F0.0 | |
1257 s(g197 | |
1258 S'TAG' | |
1259 p535 | |
1260 tp536 | |
1261 F0.0 | |
1262 s(g361 | |
1263 S'TTG' | |
1264 p537 | |
1265 tp538 | |
1266 F0.0 | |
1267 s(S'AGG' | |
1268 p539 | |
1269 S'AAG' | |
1270 p540 | |
1271 tp541 | |
1272 F1.0 | |
1273 s(g284 | |
1274 S'TGC' | |
1275 p542 | |
1276 tp543 | |
1277 F0.0 | |
1278 s(g462 | |
1279 S'CCG' | |
1280 p544 | |
1281 tp545 | |
1282 F0.0 | |
1283 s(g346 | |
1284 S'GAG' | |
1285 p546 | |
1286 tp547 | |
1287 F0.0 | |
1288 s(g339 | |
1289 S'ACC' | |
1290 p548 | |
1291 tp549 | |
1292 F0.0 | |
1293 s(g431 | |
1294 S'CGG' | |
1295 p550 | |
1296 tp551 | |
1297 F0.0 | |
1298 s(g315 | |
1299 S'CGA' | |
1300 p552 | |
1301 tp553 | |
1302 F0.0 | |
1303 s(g392 | |
1304 S'GTA' | |
1305 p554 | |
1306 tp555 | |
1307 F0.0 | |
1308 s(g139 | |
1309 S'AAG' | |
1310 p556 | |
1311 tp557 | |
1312 F0.0 | |
1313 s(g438 | |
1314 S'GAT' | |
1315 p558 | |
1316 tp559 | |
1317 F0.0 | |
1318 s(g258 | |
1319 S'TTC' | |
1320 p560 | |
1321 tp561 | |
1322 F0.0 | |
1323 s(g191 | |
1324 S'TAG' | |
1325 p562 | |
1326 tp563 | |
1327 F0.0 | |
1328 s(g161 | |
1329 S'ATT' | |
1330 p564 | |
1331 tp565 | |
1332 F0.0 | |
1333 s(g379 | |
1334 S'GGC' | |
1335 p566 | |
1336 tp567 | |
1337 F0.0 | |
1338 s(g287 | |
1339 S'CGC' | |
1340 p568 | |
1341 tp569 | |
1342 F0.0 | |
1343 s(g462 | |
1344 S'CTG' | |
1345 p570 | |
1346 tp571 | |
1347 F0.0 | |
1348 s(g366 | |
1349 S'TCT' | |
1350 p572 | |
1351 tp573 | |
1352 F0.0 | |
1353 s(g144 | |
1354 S'ACG' | |
1355 p574 | |
1356 tp575 | |
1357 F0.0 | |
1358 s(g312 | |
1359 S'CAC' | |
1360 p576 | |
1361 tp577 | |
1362 F0.0 | |
1363 s(g438 | |
1364 S'GTT' | |
1365 p578 | |
1366 tp579 | |
1367 F0.0 | |
1368 s(g284 | |
1369 S'TAC' | |
1370 p580 | |
1371 tp581 | |
1372 F0.0 | |
1373 s(g203 | |
1374 S'GCG' | |
1375 p582 | |
1376 tp583 | |
1377 F0.0 | |
1378 s(g226 | |
1379 S'GAA' | |
1380 p584 | |
1381 tp585 | |
1382 F0.0 | |
1383 s(g229 | |
1384 S'CTG' | |
1385 p586 | |
1386 tp587 | |
1387 F0.0 | |
1388 s(g299 | |
1389 S'CAA' | |
1390 p588 | |
1391 tp589 | |
1392 F0.0 | |
1393 ssS'AVG_MUT_RATE' | |
1394 p590 | |
1395 F0.0009053597295992274 | |
1396 sS'INDEL_FREQ' | |
1397 p591 | |
1398 (dp592 | |
1399 I1 | |
1400 F1.0000000000000002 | |
1401 ss. |