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view test-data/chrMT-PE-VCF-BAM-panic.vcf @ 7:fc1c7b6fb7b6 draft

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planemo upload commit e96b43f96afce6a7b7dfd4499933aad7d05c955e-dirty
author thondeboer
date Tue, 15 May 2018 18:12:29 -0400
parents 6e75a84e9338
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##fileformat=VCFv4.1
##reference=chrMT.fa
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=VMX,Number=1,Type=String,Description="SNP is Missense in these Read Frames">
##INFO=<ID=VNX,Number=1,Type=String,Description="SNP is Nonsense in these Read Frames">
##INFO=<ID=VFX,Number=1,Type=String,Description="Indel Causes Frameshift">
##INFO=<ID=WP,Number=A,Type=Integer,Description="NEAT-GenReads ploidy indicator">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=CNV,Description="Copy number variable region">
##ALT=<ID=TRANS,Description="Translocation">
##ALT=<ID=INV-TRANS,Description="Inverted translocation">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
MT	550	.	A	G	.	PASS	WP=0/1/0
MT	553	.	C	CGAGGC	.	PASS	WP=0/0/1
MT	622	.	G	T	.	PASS	WP=0/1/0
MT	626	.	G	A	.	PASS	WP=0/0/1
MT	627	.	G	A	.	PASS	WP=0/0/1
MT	669	.	T	C	.	PASS	WP=1/0/0
MT	677	.	CTCT	C	.	PASS	WP=0/0/1
MT	689	.	T	C	.	PASS	WP=0/1/0
MT	691	.	A	T	.	PASS	WP=0/0/1
MT	702	.	C	T	.	PASS	WP=0/0/1
MT	798	.	C	T	.	PASS	WP=0/0/1
MT	821	.	T	G	.	PASS	WP=1/0/0
MT	858	.	C	T	.	PASS	WP=1/0/0
MT	866	.	A	G	.	PASS	WP=0/0/1
MT	915	.	C	G	.	PASS	WP=0/0/1
MT	980	.	T	A	.	PASS	WP=1/0/0
MT	1000	.	T	A	.	PASS	WP=1/0/0
MT	1008	.	A	G	.	PASS	WP=0/1/0
MT	1041	.	A	G	.	PASS	WP=0/1/0
MT	1072	.	G	C	.	PASS	WP=1/0/0
MT	1082	.	A	G	.	PASS	WP=1/0/0
MT	1099	.	C	A	.	PASS	WP=0/0/1
MT	1116	.	A	G	.	PASS	WP=0/0/1
MT	1124	.	A	G	.	PASS	WP=1/0/0
MT	1136	.	C	G	.	PASS	WP=0/1/0
MT	1210	.	T	TC	.	PASS	WP=0/0/1
MT	1224	.	C	G	.	PASS	WP=0/0/1
MT	1250	.	C	CTTCTC	.	PASS	WP=1/0/0
MT	1292	.	A	T	.	PASS	WP=1/0/0
MT	1314	.	C	G	.	PASS	WP=0/0/1
MT	1330	.	C	CG	.	PASS	WP=0/0/1
MT	1330	.	C	T	.	PASS	WP=0/1/0
MT	1334	.	G	A	.	PASS	WP=1/0/0
MT	1361	.	G	T	.	PASS	WP=0/1/0
MT	1378	.	C	T	.	PASS	WP=1/0/0
MT	1400	.	T	G	.	PASS	WP=1/0/0
MT	1404	.	A	G	.	PASS	WP=1/0/0
MT	1423	.	A	G	.	PASS	WP=0/1/0
MT	1432	.	T	TCATTGTTT	.	PASS	WP=0/0/1
MT	1453	.	A	C	.	PASS	WP=0/1/0
MT	1456	.	T	A	.	PASS	WP=0/1/0
MT	1516	.	G	A	.	PASS	WP=1/0/0
MT	1528	.	A	G	.	PASS	WP=1/0/0
MT	1544	.	A	ACGGGA	.	PASS	WP=0/0/1
MT	1633	.	T	C	.	PASS	WP=0/1/0
MT	1635	.	C	G	.	PASS	WP=0/1/0
MT	1683	.	C	CA	.	PASS	WP=0/0/1
MT	1725	.	C	T	.	PASS	WP=0/1/0
MT	1776	.	G	A	.	PASS	WP=0/1/0
MT	1792	.	G	GT	.	PASS	WP=0/0/1
MT	1797	.	G	A	.	PASS	WP=0/1/0
MT	1802	.	A	C	.	PASS	WP=1/0/0
MT	1878	.	T	C	.	PASS	WP=0/1/0
MT	1879	.	G	C	.	PASS	WP=1/0/0
MT	1909	.	A	G	.	PASS	WP=0/0/1
MT	1937	.	A	AC	.	PASS	WP=0/0/1
MT	1982	.	G	A	.	PASS	WP=0/1/0
MT	1984	.	A	G	.	PASS	WP=0/0/1
MT	1991	.	A	AATGCT	.	PASS	WP=0/0/1
MT	2027	.	A	T	.	PASS	WP=1/0/0
MT	2034	.	A	G	.	PASS	WP=1/0/0
MT	2075	.	T	C	.	PASS	WP=1/0/1
MT	2120	.	GGAC	G	.	PASS	WP=0/1/0
MT	2135	.	A	G	.	PASS	WP=0/1/0
MT	2157	.	T	C	.	PASS	WP=0/0/1
MT	2177	.	T	G	.	PASS	WP=0/0/1
MT	2225	.	C	T	.	PASS	WP=0/0/1
MT	2229	.	A	G	.	PASS	WP=0/0/1
MT	2312	.	AACAT	A	.	PASS	WP=1/0/0
MT	2361	.	G	A	.	PASS	WP=0/1/0
MT	2363	.	A	G	.	PASS	WP=0/1/0
MT	2384	.	A	G	.	PASS	WP=1/1/1
MT	2402	.	A	G	.	PASS	WP=1/0/0
MT	2494	.	C	T	.	PASS	WP=0/1/0
MT	2497	.	T	C	.	PASS	WP=1/0/0
MT	2510	.	T	G	.	PASS	WP=0/1/0
MT	2528	.	G	GATAAACT	.	PASS	WP=1/0/0
MT	2530	.	A	G	.	PASS	WP=0/0/1
MT	2554	.	A	G	.	PASS	WP=0/1/0
MT	2564	.	A	T	.	PASS	WP=1/0/0
MT	2626	.	T	TT	.	PASS	WP=0/0/1
MT	2636	.	G	A	.	PASS	WP=0/1/0
MT	2646	.	G	A	.	PASS	WP=1/0/0
MT	2663	.	C	G	.	PASS	WP=1/0/0
MT	2673	.	G	A	.	PASS	WP=0/0/1
MT	2717	.	A	G	.	PASS	WP=1/0/0
MT	2737	.	T	C	.	PASS	WP=0/0/1
MT	2739	.	T	C	.	PASS	WP=0/0/1
MT	2756	.	C	T	.	PASS	WP=1/0/0
MT	2846	.	G	T	.	PASS	WP=0/1/0
MT	2851	.	A	G	.	PASS	WP=0/0/1
MT	2889	.	C	A	.	PASS	WP=1/0/0
MT	2938	.	A	AG	.	PASS	WP=1/0/0
MT	2947	.	TC	T	.	PASS	WP=1/0/0
MT	2979	.	T	C	.	PASS	WP=1/0/0
MT	3010	.	G	A	.	PASS	WP=1/0/0
MT	3011	.	A	G	.	PASS	WP=0/0/1
MT	3043	.	C	T	.	PASS	WP=1/0/0
MT	3066	.	C	CA	.	PASS	WP=0/0/1
MT	3104	.	T	A	.	PASS	WP=0/0/1
MT	3114	.	T	A	.	PASS	WP=0/1/0
MT	3201	.	A	G	.	PASS	WP=1/0/0
MT	3253	.	T	C	.	PASS	WP=0/0/1
MT	3288	.	A	G	.	PASS	WP=0/1/0
MT	3301	.	A	T	.	PASS	WP=0/1/0
MT	3325	.	C	G	.	PASS	WP=0/1/0
MT	3363	.	C	T	.	PASS	WP=0/1/0
MT	3375	.	C	T	.	PASS	WP=0/0/1
MT	3385	.	A	G	.	PASS	WP=0/1/0
MT	3416	.	CCAACG	C	.	PASS	WP=0/0/1
MT	3460	.	G	A	.	PASS	WP=0/1/0
MT	3539	.	C	CACA	.	PASS	WP=0/1/0
MT	3544	.	A	G	.	PASS	WP=0/1/0
MT	3647	.	A	G	.	PASS	WP=1/0/0
MT	3809	.	C	A	.	PASS	WP=1/0/0
MT	3901	.	G	GT	.	PASS	WP=1/0/0
MT	3928	.	G	A	.	PASS	WP=0/0/1
MT	3929	.	TC	T	.	PASS	WP=1/0/0
MT	3955	.	G	A	.	PASS	WP=0/1/0
MT	3958	.	G	A	.	PASS	WP=0/0/1
MT	3967	.	G	A	.	PASS	WP=1/0/0
MT	3987	.	A	T	.	PASS	WP=0/1/0
MT	3998	.	T	C	.	PASS	WP=0/1/0
MT	4114	.	T	C	.	PASS	WP=1/0/0
MT	4121	.	G	C	.	PASS	WP=0/1/0
MT	4123	.	A	G	.	PASS	WP=0/1/0
MT	4150	.	T	A	.	PASS	WP=1/0/0
MT	4171	.	C	T	.	PASS	WP=0/1/0
MT	4178	.	A	G	.	PASS	WP=0/0/1
MT	4201	.	G	A	.	PASS	WP=1/0/0
MT	4225	.	A	G	.	PASS	WP=1/0/0
MT	4251	.	C	CT	.	PASS	WP=0/1/0
MT	4276	.	A	AA	.	PASS	WP=0/1/0
MT	4317	.	A	G	.	PASS	WP=1/0/0
MT	4353	.	T	C	.	PASS	WP=1/0/0
MT	4359	.	A	C	.	PASS	WP=1/0/0
MT	4442	.	A	G	.	PASS	WP=1/0/0
MT	4448	.	T	A	.	PASS	WP=0/0/1
MT	4454	.	T	G	.	PASS	WP=1/0/0
MT	4459	.	T	A	.	PASS	WP=1/0/0
MT	4460	.	T	C	.	PASS	WP=0/1/0
MT	4468	.	T	G	.	PASS	WP=0/0/1
MT	4469	.	A	G	.	PASS	WP=1/0/0
MT	4559	.	A	G	.	PASS	WP=1/0/0
MT	4569	.	G	A	.	PASS	WP=1/0/0
MT	4572	.	A	ACG	.	PASS	WP=1/0/0
MT	4587	.	T	A	.	PASS	WP=0/1/0
MT	4589	.	T	C	.	PASS	WP=1/0/0
MT	4627	.	C	T	.	PASS	WP=1/0/1
MT	4653	.	A	G	.	PASS	WP=0/1/0
MT	4654	.	C	T	.	PASS	WP=0/1/0
MT	4669	.	C	T	.	PASS	WP=0/1/0
MT	4684	.	T	C	.	PASS	WP=1/0/0
MT	4719	.	T	TCCGTT	.	PASS	WP=0/0/1
MT	4771	.	C	T	.	PASS	WP=1/0/0
MT	4802	.	T	C	.	PASS	WP=0/1/0
MT	4803	.	C	G	.	PASS	WP=1/0/0
MT	4811	.	A	G	.	PASS	WP=0/1/0
MT	4812	.	G	A	.	PASS	WP=0/0/1
MT	4845	.	T	C	.	PASS	WP=1/0/0
MT	4851	.	C	T	.	PASS	WP=1/0/0
MT	4853	.	G	A	.	PASS	WP=1/0/0
MT	4867	.	G	GC	.	PASS	WP=0/1/0
MT	4869	.	C	T	.	PASS	WP=0/1/0
MT	4908	.	C	T	.	PASS	WP=1/0/0
MT	4977	.	T	C	.	PASS	WP=0/1/0
MT	4995	.	C	T	.	PASS	WP=0/0/1
MT	4999	.	A	T	.	PASS	WP=1/0/0
MT	5015	.	C	A	.	PASS	WP=0/1/0
MT	5018	.	A	T	.	PASS	WP=0/0/1
MT	5112	.	G	A	.	PASS	WP=1/0/0
MT	5133	.	A	G	.	PASS	WP=0/1/0
MT	5382	.	CT	C	.	PASS	WP=0/0/1
MT	5484	.	A	G	.	PASS	WP=0/1/0
MT	5497	.	T	C	.	PASS	WP=0/0/1
MT	5505	.	A	AAGA	.	PASS	WP=0/1/0
MT	5506	.	T	A	.	PASS	WP=1/0/0
MT	5556	.	G	A	.	PASS	WP=1/0/0
MT	5632	.	C	A	.	PASS	WP=1/0/0
MT	5639	.	A	G	.	PASS	WP=1/0/0
MT	5672	.	T	C	.	PASS	WP=0/0/1
MT	5694	.	A	G	.	PASS	WP=0/1/0
MT	5696	.	C	T	.	PASS	WP=0/1/0
MT	5860	.	T	A	.	PASS	WP=0/0/1
MT	5898	.	C	T	.	PASS	WP=1/0/0
MT	5901	.	C	T	.	PASS	WP=1/0/0
MT	5912	.	C	T	.	PASS	WP=0/0/1
MT	5914	.	A	AC	.	PASS	WP=1/0/0
MT	5930	.	T	C	.	PASS	WP=0/0/1
MT	5932	.	C	G	.	PASS	WP=0/0/1
MT	5969	.	C	A	.	PASS	WP=0/0/1
MT	5988	.	C	T	.	PASS	WP=0/0/1
MT	6079	.	C	A	.	PASS	WP=0/1/0
MT	6110	.	A	G	.	PASS	WP=1/0/0
MT	6122	.	C	T	.	PASS	WP=0/1/0
MT	6128	.	C	T	.	PASS	WP=1/1/1
MT	6141	.	A	T	.	PASS	WP=0/1/0
MT	6229	.	T	C	.	PASS	WP=1/0/0
MT	6247	.	C	A	.	PASS	WP=1/0/0
MT	6250	.	C	T	.	PASS	WP=0/1/0
MT	6271	.	G	T	.	PASS	WP=0/1/0
MT	6310	.	A	AA	.	PASS	WP=1/0/0
MT	6334	.	A	T	.	PASS	WP=0/0/1
MT	6339	.	A	G	.	PASS	WP=0/0/1
MT	6350	.	C	T	.	PASS	WP=0/1/0
MT	6362	.	A	AC	.	PASS	WP=0/1/0
MT	6408	.	A	C	.	PASS	WP=0/0/1
MT	6417	.	A	G	.	PASS	WP=1/0/0
MT	6431	.	A	G	.	PASS	WP=0/1/0
MT	6432	.	A	G	.	PASS	WP=1/0/0
MT	6463	.	C	T	.	PASS	WP=1/0/0
MT	6473	.	CAC	C	.	PASS	WP=0/1/0
MT	6524	.	T	C	.	PASS	WP=0/0/1
MT	6539	.	C	T	.	PASS	WP=0/1/0
MT	6554	.	C	T	.	PASS	WP=1/0/0
MT	6623	.	C	T	.	PASS	WP=0/1/0
MT	6624	.	C	T	.	PASS	WP=0/0/1
MT	6625	.	C	G	.	PASS	WP=0/0/1
MT	6628	.	A	G	.	PASS	WP=1/0/0
MT	6634	.	A	G	.	PASS	WP=0/1/0
MT	6647	.	A	G	.	PASS	WP=1/0/0
MT	6663	.	A	G	.	PASS	WP=0/1/0
MT	6708	.	G	A	.	PASS	WP=1/0/0
MT	6756	.	T	TGGTCAAGCTG	.	PASS	WP=0/0/1
MT	6780	.	T	C	.	PASS	WP=1/0/0
MT	6816	.	T	C	.	PASS	WP=0/1/0
MT	6820	.	C	T	.	PASS	WP=1/0/0
MT	6861	.	G	GAG	.	PASS	WP=0/1/0
MT	6941	.	T	C	.	PASS	WP=0/0/1
MT	6956	.	T	C	.	PASS	WP=1/0/0
MT	6967	.	G	A	.	PASS	WP=0/0/1
MT	7034	.	C	G	.	PASS	WP=0/0/1
MT	7100	.	A	G	.	PASS	WP=0/0/1
MT	7120	.	A	G	.	PASS	WP=0/0/1
MT	7124	.	A	G	.	PASS	WP=0/0/1
MT	7205	.	C	T	.	PASS	WP=0/1/0
MT	7262	.	A	ACTTAT	.	PASS	WP=0/0/1
MT	7270	.	T	C	.	PASS	WP=0/1/0
MT	7314	.	A	G	.	PASS	WP=1/0/0
MT	7320	.	T	C	.	PASS	WP=0/1/0
MT	7362	.	G	GTT	.	PASS	WP=0/0/1
MT	7379	.	G	A	.	PASS	WP=1/0/0
MT	7462	.	C	CAG	.	PASS	WP=1/0/0
MT	7479	.	G	GA	.	PASS	WP=1/0/0
MT	7493	.	C	A	.	PASS	WP=1/0/0
MT	7511	.	T	TAC	.	PASS	WP=1/1/1
MT	7527	.	G	A	.	PASS	WP=1/0/0
MT	7535	.	A	G	.	PASS	WP=0/0/1
MT	7540	.	A	G	.	PASS	WP=1/1/1
MT	7583	.	T	C	.	PASS	WP=0/0/1
MT	7588	.	G	C	.	PASS	WP=1/0/0
MT	7610	.	C	T	.	PASS	WP=0/0/1
MT	7614	.	A	AA	.	PASS	WP=1/0/0
MT	7622	.	A	C	.	PASS	WP=0/0/1
MT	7642	.	G	A	.	PASS	WP=0/1/0
MT	7648	.	C	T	.	PASS	WP=1/0/0
MT	7690	.	C	T	.	PASS	WP=1/0/0
MT	7708	.	C	G	.	PASS	WP=0/1/0
MT	7780	.	A	G	.	PASS	WP=0/0/1
MT	7788	.	T	A	.	PASS	WP=1/0/0
MT	7828	.	A	G	.	PASS	WP=1/1/1
MT	7872	.	C	T	.	PASS	WP=0/1/0
MT	7888	.	C	G	.	PASS	WP=0/1/0
MT	7891	.	C	G	.	PASS	WP=0/0/1
MT	7903	.	A	G	.	PASS	WP=0/0/1
MT	7985	.	C	T	.	PASS	WP=0/1/0
MT	8072	.	T	A	.	PASS	WP=0/0/1
MT	8093	.	T	C	.	PASS	WP=0/0/1
MT	8097	.	A	C	.	PASS	WP=0/0/1
MT	8116	.	A	G	.	PASS	WP=0/0/1
MT	8140	.	C	T	.	PASS	WP=0/0/1
MT	8147	.	C	G	.	PASS	WP=1/0/0
MT	8167	.	T	C	.	PASS	WP=0/0/1
MT	8211	.	T	C	.	PASS	WP=1/0/0
MT	8246	.	A	G	.	PASS	WP=0/1/0
MT	8251	.	G	A	.	PASS	WP=0/0/1
MT	8308	.	A	G	.	PASS	WP=0/1/0
MT	8311	.	T	C	.	PASS	WP=0/0/1
MT	8312	.	AGC	A	.	PASS	WP=0/0/1
MT	8322	.	T	A	.	PASS	WP=1/0/0
MT	8363	.	G	A	.	PASS	WP=0/1/0
MT	8371	.	C	A	.	PASS	WP=1/1/1
MT	8397	.	C	T	.	PASS	WP=0/1/0
MT	8407	.	C	T	.	PASS	WP=0/0/1
MT	8410	.	C	T	.	PASS	WP=0/1/0
MT	8423	.	C	G	.	PASS	WP=0/1/0
MT	8436	.	C	A	.	PASS	WP=1/0/0
MT	8458	.	A	C	.	PASS	WP=0/0/1
MT	8486	.	C	T	.	PASS	WP=0/1/0
MT	8543	.	TC	T	.	PASS	WP=0/1/0
MT	8624	.	C	A	.	PASS	WP=0/0/1
MT	8653	.	A	G	.	PASS	WP=1/0/0
MT	8665	.	C	T	.	PASS	WP=0/0/1
MT	8685	.	C	T	.	PASS	WP=0/1/0
MT	8732	.	C	T	.	PASS	WP=1/0/0
MT	8740	.	CTAG	C	.	PASS	WP=0/0/1
MT	8772	.	T	TGC	.	PASS	WP=0/0/1
MT	8793	.	T	C	.	PASS	WP=1/0/0
MT	8826	.	A	C	.	PASS	WP=0/1/0
MT	8834	.	C	T	.	PASS	WP=0/1/0
MT	8835	.	C	CG	.	PASS	WP=1/0/0
MT	8841	.	C	T	.	PASS	WP=0/1/0
MT	8847	.	C	CG	.	PASS	WP=0/1/0
MT	8857	.	G	A	.	PASS	WP=0/1/0
MT	8870	.	T	G	.	PASS	WP=1/0/0
MT	8948	.	T	C	.	PASS	WP=0/0/1
MT	8977	.	A	G	.	PASS	WP=0/0/1
MT	9028	.	C	G	.	PASS	WP=0/1/0
MT	9048	.	T	C	.	PASS	WP=0/1/0
MT	9072	.	A	G	.	PASS	WP=1/0/0
MT	9076	.	A	G	.	PASS	WP=0/1/0
MT	9111	.	T	C	.	PASS	WP=0/0/1
MT	9112	.	C	A	.	PASS	WP=1/0/0
MT	9133	.	G	A	.	PASS	WP=0/0/1
MT	9150	.	A	G	.	PASS	WP=0/1/0
MT	9154	.	C	CTC	.	PASS	WP=1/0/0
MT	9233	.	T	C	.	PASS	WP=1/0/0
MT	9244	.	C	T	.	PASS	WP=0/1/0
MT	9316	.	T	C	.	PASS	WP=1/0/0
MT	9329	.	G	A	.	PASS	WP=0/0/1
MT	9337	.	TA	T	.	PASS	WP=0/1/0
MT	9371	.	C	T	.	PASS	WP=1/0/0
MT	9507	.	T	TCAAGTACTGA	.	PASS	WP=0/1/0
MT	9537	.	C	T	.	PASS	WP=1/0/0
MT	9540	.	T	C	.	PASS	WP=0/1/0
MT	9573	.	C	CC	.	PASS	WP=1/0/0
MT	9576	.	C	T	.	PASS	WP=0/1/0
MT	9600	.	C	T	.	PASS	WP=0/1/0
MT	9634	.	C	T	.	PASS	WP=0/1/0
MT	9649	.	ACC	A	.	PASS	WP=1/0/0
MT	9713	.	G	A	.	PASS	WP=0/0/1
MT	9744	.	G	A	.	PASS	WP=0/1/0
MT	9771	.	T	C	.	PASS	WP=0/1/0
MT	9834	.	A	G	.	PASS	WP=1/0/0
MT	9846	.	T	C	.	PASS	WP=1/0/0
MT	9897	.	C	T	.	PASS	WP=1/0/0
MT	9916	.	C	CC	.	PASS	WP=0/1/0
MT	9919	.	C	T	.	PASS	WP=1/0/0
MT	9942	.	G	T	.	PASS	WP=0/1/0
MT	9954	.	C	T	.	PASS	WP=1/0/0
MT	10004	.	A	G	.	PASS	WP=0/0/1
MT	10011	.	A	G	.	PASS	WP=0/0/1
MT	10022	.	C	T	.	PASS	WP=1/0/0
MT	10027	.	T	TG	.	PASS	WP=0/0/1
MT	10047	.	C	T	.	PASS	WP=0/1/0
MT	10176	.	G	A	.	PASS	WP=0/0/1
MT	10189	.	T	C	.	PASS	WP=0/1/0
MT	10239	.	A	T	.	PASS	WP=0/0/1
MT	10248	.	T	G	.	PASS	WP=0/0/1
MT	10261	.	A	G	.	PASS	WP=0/1/0
MT	10266	.	G	A	.	PASS	WP=1/0/0
MT	10289	.	A	AAAT	.	PASS	WP=0/0/1
MT	10296	.	C	T	.	PASS	WP=1/0/0
MT	10416	.	T	C	.	PASS	WP=1/1/0
MT	10418	.	A	C	.	PASS	WP=0/1/0
MT	10478	.	C	T	.	PASS	WP=0/1/0
MT	10492	.	T	C	.	PASS	WP=0/0/1
MT	10568	.	A	G	.	PASS	WP=0/0/1
MT	10569	.	G	A	.	PASS	WP=0/1/0
MT	10588	.	T	C	.	PASS	WP=1/0/0
MT	10636	.	C	A	.	PASS	WP=0/1/0
MT	10668	.	G	A	.	PASS	WP=0/0/1
MT	10706	.	C	T	.	PASS	WP=1/0/0
MT	10752	.	C	T	.	PASS	WP=0/0/1
MT	10771	.	A	G	.	PASS	WP=1/0/0
MT	10793	.	C	T	.	PASS	WP=0/1/0
MT	10835	.	A	C	.	PASS	WP=0/0/1
MT	10847	.	C	T	.	PASS	WP=0/1/0
MT	10859	.	A	T	.	PASS	WP=0/0/1
MT	10868	.	A	C	.	PASS	WP=0/1/0
MT	10895	.	A	AGA	.	PASS	WP=1/0/0
MT	10903	.	C	A	.	PASS	WP=1/0/0
MT	10915	.	T	C	.	PASS	WP=0/0/1
MT	10934	.	G	A	.	PASS	WP=1/0/0
MT	10946	.	A	C	.	PASS	WP=1/0/0
MT	11017	.	T	C	.	PASS	WP=1/0/0
MT	11054	.	C	T	.	PASS	WP=1/0/0
MT	11063	.	C	CTG	.	PASS	WP=1/0/0
MT	11072	.	TCCT	T	.	PASS	WP=1/0/0
MT	11108	.	A	G	.	PASS	WP=0/0/1
MT	11119	.	C	CTTGATTGCGG	.	PASS	WP=0/1/0
MT	11136	.	T	C	.	PASS	WP=1/0/0
MT	11154	.	T	C	.	PASS	WP=0/0/1
MT	11158	.	C	G	.	PASS	WP=0/0/1
MT	11195	.	G	A	.	PASS	WP=0/0/1
MT	11204	.	T	C	.	PASS	WP=0/1/0
MT	11215	.	C	T	.	PASS	WP=0/1/0
MT	11268	.	C	G	.	PASS	WP=0/0/1
MT	11269	.	C	T	.	PASS	WP=0/0/1
MT	11271	.	T	C	.	PASS	WP=0/0/1
MT	11285	.	A	G	.	PASS	WP=0/0/1
MT	11320	.	A	G	.	PASS	WP=0/0/1
MT	11389	.	C	T	.	PASS	WP=0/0/1
MT	11412	.	A	AA	.	PASS	WP=0/0/1
MT	11449	.	A	G	.	PASS	WP=1/0/0
MT	11554	.	C	T	.	PASS	WP=0/0/1
MT	11595	.	A	G	.	PASS	WP=1/0/0
MT	11661	.	T	G	.	PASS	WP=0/1/0
MT	11686	.	C	T	.	PASS	WP=0/1/0
MT	11690	.	G	A	.	PASS	WP=0/1/0
MT	11704	.	C	T	.	PASS	WP=0/1/0
MT	11713	.	C	G	.	PASS	WP=0/0/1
MT	11738	.	T	C	.	PASS	WP=1/0/0
MT	11766	.	G	A	.	PASS	WP=0/1/0
MT	11788	.	C	T	.	PASS	WP=0/0/1
MT	11790	.	T	A	.	PASS	WP=0/0/1
MT	11795	.	C	G	.	PASS	WP=1/0/0
MT	11862	.	C	A	.	PASS	WP=1/0/0
MT	11863	.	C	G	.	PASS	WP=0/0/1
MT	11920	.	C	G	.	PASS	WP=1/0/0
MT	11933	.	A	G	.	PASS	WP=0/1/0
MT	11968	.	A	G	.	PASS	WP=1/0/0
MT	12054	.	G	A	.	PASS	WP=1/0/0
MT	12104	.	C	G	.	PASS	WP=0/0/1
MT	12136	.	T	C	.	PASS	WP=0/0/1
MT	12207	.	G	A	.	PASS	WP=1/0/0
MT	12243	.	TGT	T	.	PASS	WP=0/0/1
MT	12256	.	G	A	.	PASS	WP=0/1/0
MT	12309	.	A	G	.	PASS	WP=0/0/1
MT	12341	.	C	G	.	PASS	WP=1/0/0
MT	12399	.	C	T	.	PASS	WP=0/1/0
MT	12402	.	C	T	.	PASS	WP=0/0/1
MT	12433	.	C	T	.	PASS	WP=1/0/0
MT	12472	.	A	G	.	PASS	WP=0/1/0
MT	12481	.	T	TAAC	.	PASS	WP=0/1/0
MT	12500	.	T	G	.	PASS	WP=0/1/0
MT	12576	.	C	T	.	PASS	WP=0/1/0
MT	12577	.	A	G	.	PASS	WP=1/0/0
MT	12783	.	TATA	T	.	PASS	WP=0/0/1
MT	12789	.	C	T	.	PASS	WP=0/0/1
MT	12790	.	T	C	.	PASS	WP=0/0/1
MT	12793	.	T	A	.	PASS	WP=0/0/1
MT	12814	.	G	A	.	PASS	WP=1/0/0
MT	12907	.	C	T	.	PASS	WP=0/0/1
MT	12910	.	C	T	.	PASS	WP=0/1/0
MT	12929	.	C	A	.	PASS	WP=0/0/1
MT	13002	.	C	T	.	PASS	WP=0/1/0
MT	13003	.	A	G	.	PASS	WP=1/0/0
MT	13016	.	T	C	.	PASS	WP=1/0/0
MT	13017	.	A	G	.	PASS	WP=1/0/0
MT	13024	.	C	T	.	PASS	WP=0/1/0
MT	13094	.	T	A	.	PASS	WP=1/0/0
MT	13103	.	G	GA	.	PASS	WP=0/1/0
MT	13232	.	A	G	.	PASS	WP=0/0/1
MT	13263	.	A	G	.	PASS	WP=0/0/1
MT	13265	.	T	G	.	PASS	WP=0/1/0
MT	13289	.	G	A	.	PASS	WP=0/0/1
MT	13298	.	A	G	.	PASS	WP=0/0/1
MT	13310	.	CATT	C	.	PASS	WP=0/0/1
MT	13323	.	C	T	.	PASS	WP=0/1/0
MT	13344	.	AGCCA	A	.	PASS	WP=1/0/0
MT	13369	.	T	C	.	PASS	WP=1/0/0
MT	13380	.	C	CGTC	.	PASS	WP=0/1/0
MT	13384	.	C	A	.	PASS	WP=0/0/1
MT	13386	.	T	C	.	PASS	WP=1/0/0
MT	13411	.	A	G	.	PASS	WP=0/1/0
MT	13462	.	G	A	.	PASS	WP=0/1/0
MT	13488	.	T	A	.	PASS	WP=1/0/0
MT	13493	.	T	G	.	PASS	WP=0/1/0
MT	13501	.	T	TCGTCT	.	PASS	WP=0/0/1
MT	13617	.	T	C	.	PASS	WP=0/0/1
MT	13619	.	T	C	.	PASS	WP=0/1/0
MT	13639	.	CCT	C	.	PASS	WP=0/0/1
MT	13672	.	AA	A	.	PASS	WP=0/0/1
MT	13758	.	C	T	.	PASS	WP=0/0/1
MT	13763	.	C	A	.	PASS	WP=0/0/1
MT	13787	.	T	G	.	PASS	WP=0/0/1
MT	13808	.	T	A	.	PASS	WP=0/0/1
MT	13894	.	T	C	.	PASS	WP=0/1/0
MT	13941	.	C	T	.	PASS	WP=0/1/0
MT	13943	.	C	A	.	PASS	WP=0/1/0
MT	14005	.	T	C	.	PASS	WP=0/1/0
MT	14008	.	C	T	.	PASS	WP=1/0/0
MT	14060	.	T	G	.	PASS	WP=1/0/0
MT	14067	.	C	T	.	PASS	WP=1/0/0
MT	14114	.	T	TA	.	PASS	WP=1/0/0
MT	14137	.	C	T	.	PASS	WP=1/0/0
MT	14175	.	C	T	.	PASS	WP=0/1/0
MT	14187	.	C	A	.	PASS	WP=0/1/0
MT	14242	.	A	G	.	PASS	WP=0/0/1
MT	14326	.	T	C	.	PASS	WP=1/1/1
MT	14356	.	C	T	.	PASS	WP=0/1/0
MT	14373	.	C	T	.	PASS	WP=0/1/0
MT	14383	.	C	CTTCGTCC	.	PASS	WP=1/0/0
MT	14405	.	A	G	.	PASS	WP=0/0/1
MT	14410	.	G	A	.	PASS	WP=0/1/0
MT	14460	.	C	T	.	PASS	WP=0/1/0
MT	14492	.	C	G	.	PASS	WP=1/0/0
MT	14520	.	C	A	.	PASS	WP=1/0/0
MT	14522	.	A	G	.	PASS	WP=0/1/0
MT	14595	.	A	G	.	PASS	WP=0/1/0
MT	14612	.	G	A	.	PASS	WP=1/0/0
MT	14653	.	C	T	.	PASS	WP=0/0/1
MT	14665	.	A	G	.	PASS	WP=1/0/0
MT	14673	.	T	C	.	PASS	WP=1/0/0
MT	14699	.	A	G	.	PASS	WP=0/1/0
MT	14703	.	A	T	.	PASS	WP=1/0/0
MT	14727	.	T	C	.	PASS	WP=0/1/0
MT	14740	.	A	G	.	PASS	WP=0/0/1
MT	14807	.	CT	C	.	PASS	WP=1/0/0
MT	14809	.	C	T	.	PASS	WP=1/0/0
MT	14831	.	G	A	.	PASS	WP=0/0/1
MT	14851	.	A	G	.	PASS	WP=1/0/0
MT	14895	.	T	C	.	PASS	WP=1/0/0
MT	14900	.	G	A	.	PASS	WP=0/1/0
MT	14941	.	A	G	.	PASS	WP=0/1/0
MT	15009	.	C	T	.	PASS	WP=0/1/0
MT	15050	.	C	CAAGGCATAT	.	PASS	WP=0/1/0
MT	15066	.	T	C	.	PASS	WP=1/0/0
MT	15073	.	C	T	.	PASS	WP=0/0/1
MT	15081	.	C	T	.	PASS	WP=0/0/1
MT	15110	.	GCAACT	G	.	PASS	WP=0/0/1
MT	15123	.	C	G	.	PASS	WP=0/0/1
MT	15123	.	C	T	.	PASS	WP=0/1/0
MT	15125	.	G	A	.	PASS	WP=1/0/0
MT	15190	.	C	T	.	PASS	WP=1/0/0
MT	15231	.	A	G	.	PASS	WP=0/1/0
MT	15234	.	G	A	.	PASS	WP=0/0/1
MT	15270	.	T	A	.	PASS	WP=0/0/1
MT	15280	.	C	T	.	PASS	WP=0/0/1
MT	15293	.	T	C	.	PASS	WP=0/1/0
MT	15307	.	C	T	.	PASS	WP=0/1/0
MT	15311	.	A	AT	.	PASS	WP=0/1/0
MT	15317	.	G	A	.	PASS	WP=0/1/0
MT	15324	.	C	T	.	PASS	WP=1/0/0
MT	15375	.	G	A	.	PASS	WP=1/0/0
MT	15427	.	A	G	.	PASS	WP=1/0/0
MT	15477	.	T	C	.	PASS	WP=1/0/0
MT	15527	.	C	G	.	PASS	WP=1/0/0
MT	15565	.	T	C	.	PASS	WP=1/0/0
MT	15569	.	C	T	.	PASS	WP=0/1/0
MT	15596	.	G	GAGTCC	.	PASS	WP=1/0/0
MT	15608	.	C	G	.	PASS	WP=1/0/0
MT	15611	.	G	C	.	PASS	WP=0/1/0
MT	15683	.	CA	C	.	PASS	WP=0/1/0
MT	15748	.	T	C	.	PASS	WP=0/0/1
MT	15762	.	G	A	.	PASS	WP=1/0/0
MT	15807	.	C	T	.	PASS	WP=1/0/0
MT	15822	.	T	G	.	PASS	WP=0/0/1
MT	15833	.	C	A	.	PASS	WP=0/0/1
MT	15847	.	A	G	.	PASS	WP=0/1/0
MT	15957	.	C	T	.	PASS	WP=1/0/0
MT	15968	.	T	C	.	PASS	WP=1/0/0
MT	15997	.	T	C	.	PASS	WP=0/0/1
MT	15999	.	A	C	.	PASS	WP=0/0/1
MT	16062	.	A	G	.	PASS	WP=0/1/0
MT	16067	.	C	T	.	PASS	WP=0/0/1
MT	16088	.	T	C	.	PASS	WP=0/0/1
MT	16116	.	A	G	.	PASS	WP=1/0/0
MT	16132	.	A	G	.	PASS	WP=0/1/0
MT	16201	.	C	A	.	PASS	WP=1/0/0
MT	16203	.	A	T	.	PASS	WP=0/1/0
MT	16217	.	T	C	.	PASS	WP=1/0/0
MT	16228	.	C	T	.	PASS	WP=1/0/0
MT	16266	.	C	T	.	PASS	WP=0/1/0
MT	16274	.	G	A	.	PASS	WP=0/0/1
MT	16277	.	A	C	.	PASS	WP=0/0/1
MT	16295	.	C	T	.	PASS	WP=0/0/1
MT	16301	.	C	T	.	PASS	WP=0/1/0
MT	16308	.	T	C	.	PASS	WP=1/1/1
MT	16345	.	A	T	.	PASS	WP=1/0/0
MT	16390	.	G	A	.	PASS	WP=1/0/0
MT	16409	.	T	C	.	PASS	WP=0/1/0
MT	16413	.	T	C	.	PASS	WP=0/1/0
MT	16555	.	T	C	.	PASS	WP=0/0/1