# HG changeset patch
# User tiagoantao
# Date 1455127700 18000
# Node ID 92ba49d68ef160d0796922ed76689891a371607d
# Parent  96f850a2b4181f276b37675fff48c33cba3e8d82
planemo upload commit 9b504bd948d6079168cbd5cf6f9aa5e5488cde9b-dirty

diff -r 96f850a2b418 -r 92ba49d68ef1 STACKS_clone_filter.py
--- a/STACKS_clone_filter.py	Wed Feb 10 12:57:52 2016 -0500
+++ b/STACKS_clone_filter.py	Wed Feb 10 13:08:20 2016 -0500
@@ -43,7 +43,7 @@
         cmd_line.extend(['--oligo_len_1', options.oligo_len_1])
     if options.oligo_len_2 > -1:
         cmd_line.extend(['--oligo_len_2', options.oligo_len_2])
-    cmd_line.append('--' + options.oligo_len_2)
+    cmd_line.append('--' + options.opt)
 
     print "[CMD]:"+' '.join(cmd_line)
     subprocess.call(cmd_line)