Mercurial > repos > tiagoantao > package_raxml_8_2_4

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planemo upload commit 2c71c5e5604b9c05648b883fddbb163a8e03c807
author tiagoantao
date Tue, 03 Nov 2015 16:26:44 -0500
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="raxml" version="8.2.4">
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4 <install version="1.0">
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5 <actions>
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6 <!-- Download source code -->
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7 <action type="download_by_url" target_filename="standard-RAxML-8.2.4.tar.gz">https://github.com/stamatak/standard-RAxML/archive/v8.2.4.tar.gz</action>
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8
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9 <!-- Build raxml -->
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10 <action type="shell_command">make -f Makefile.PTHREADS.gcc</action>
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11
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12 <!-- Install raxml -->
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13 <action type="shell_command">mkdir -p $INSTALL_DIR/bin</action>
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14 <action type="shell_command">cp raxmlHPC-PTHREADS $INSTALL_DIR/bin</action>
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15
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16 <!-- Set environment for dependent repositories -->
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17 <action type="set_environment">
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18 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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19 </action>
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20 </actions>
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21 </install>
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22 </package>
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23 </tool_dependency>