# HG changeset patch # User tiagoantao # Date 1455130951 18000 # Node ID a277203b991f393846674db76b8b4f5cfc9d2d3f Uploaded diff -r 000000000000 -r a277203b991f tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Feb 10 14:02:31 2016 -0500 @@ -0,0 +1,23 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="stacks" version="1.35"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://creskolab.uoregon.edu/stacks/source/stacks-1.35.tar.gz</action> + <action type="shell_command">./configure --prefix=$INSTALL_DIR</action> + <action type="shell_command">make</action> + <action type="shell_command">make install</action> + <!-- create env.sh --> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin/</environment_variable> + <environment_variable name="INSTALL_DIR" action="set_to">$INSTALL_DIR/</environment_variable> + </action> + + </actions> + + </install> + <readme> + This package installs STACKS from the sources available. Based on Cyril Monjeuad version + </readme> + </package> +</tool_dependency>