<tool id="Autocorrelation" name="Compute the autocorrelation" version="1.0.0">
  <description>on data in a Wiggle file</description>
  <command interpreter="sh">galaxyToolRunner.sh ngs.Autocorrelation -i $input -l $windows -m $max -o $output</command>
  <inputs>
      <param format="bigwig,wig" name="input" type="data" label="Input data" />
      <param format="bed,bedgraph,gff" name="windows" type="data" label="List of intervals" />
      <param name="max" type="integer" value="200" label="Maximum shift" />
  </inputs>
  <outputs>
      <data format="tabular" name="output" />
  </outputs>
  
<help>
.. class:: warningmark

This tool requires Wiggle/BigWig input data.
</help>
</tool>
