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comparison test-data/slncky/reads.simPE.browse.html @ 0:a940c4a36a43 draft default tip

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Upload ctat tools.
author trinity_ctat
date Tue, 17 Jul 2018 11:49:16 -0400
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-1:000000000000 0:a940c4a36a43
1 <html>
2 <head>
3 <script type="text/javascript" charset="utf8" src="search.js"></script>
4
5 <!-- DataTables CSS -->
6 <link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/1.10.9/css/jquery.dataTables.css">
7 <!-- Bootstrap CSS -->
8 <link rel="stylesheet" type="text/css" href="https://bootswatch.com/paper/bootstrap.min.css">
9 <!-- jQuery -->
10 <script type="text/javascript" charset="utf8" src="https://code.jquery.com/jquery-1.11.3.min.js"></script>
11
12 <!-- DataTables -->
13 <script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/1.10.9/js/jquery.dataTables.min.js"></script>
14 <style> select { font-size: 90%; width: 30px; } th { font-size: 80%; } td { font-size: 80%; } td.red {color: red;} td.green {color: #009900;} </style>
15 <script type="text/javascript" class="init">
16 $(document).ready(function() {
17 $('#table_id').DataTable();
18 } );
19 </script>
20
21
22 </head>
23 <body>
24
25 <nav class="navbar navbar-default">
26 <div class="container-fluid" style="position: absolute; width: 100%;">
27 <div class="navbar-header">
28 <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#bs-example-navbar-collapse-2">
29 <span class="sr-only">Toggle navigation</span>
30 <span class="icon-bar"></span>
31 <span class="icon-bar"></span>
32 <span class="icon-bar"></span>
33 </button>
34 <a class ="navbar-brand" href="#"><p style="font-size:26"><em>slncky</em> Evolution Browser</p></a>
35 </div>
36
37 <div class="collapse navbar-collapse" id="bs-example-navbar-collapse-2">
38 <ul class="nav navbar-nav">
39
40 <a href="#"><li class="active">Browse</a></li>
41 </ul>
42 <ul class="nav navbar-nav navbar-right">
43 </ul>
44 </div>
45 </div>
46 </nav>
47
48 <div class="container">
49 <div class="jumbotron">
50 <h2>Browse lncRNAs</h2>
51 <hr>
52 <br>
53 <table id="table_id" class="table table-striped table-hover" cellspacing="0" width="100%">
54 <thead>
55 <tr>
56 <th>Lnc</th>
57 <th>Name</th>
58 <th>Ortholog</th>
59 <th>Ortholog Name</th>
60 <th>Type</th>
61 <th>Transcript-Transcript Identity</th>
62 <th>Trascript-Genome Identity</th>
63 <th>Indel Rate</th>
64 <th>Conserved Splice Sites</th>
65 <th>Total Splice Sites</th>
66 <th>Lnc Exons Aligned</th>
67 <th>Ortholog Exons Aligned</th>
68 </tr>
69 </thead>
70 <tbody>
71 <tr><td><a href="lnc/STRG.25.1.html" target="_blank">STRG.25.1</a></td><td>MALAT1</td><td>uc008gfj.2</td><td>Malat1</td><td>intergenic</td><td>0.63</td><td>0.63</td><td>-</td><td>0.0</td><td>0</td><td>1,</td><td>1,</td></tr>
72 <tr><td><a href="lnc/STRG.5.1.html" target="_blank">STRG.5.1</a></td><td>Unannotated</td><td>uc009vfa.1</td><td>Atpase6</td><td>intergenic</td><td>0.00</td><td>0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
73 <tr><td><a href="lnc/STRG.52.1.html" target="_blank">STRG.52.1</a></td><td>JA760615</td><td>uc012hdm.1</td><td>BC071253</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
74 <tr><td><a href="lnc/STRG.48.2.html" target="_blank">STRG.48.2</a></td><td>OK/SW-cl.16</td><td>uc009vez.1</td><td>Cox2</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
75 <tr><td><a href="lnc/STRG.44.1.html" target="_blank">STRG.44.1</a></td><td>TVAS5</td><td>uc009vew.1</td><td>AK018753</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
76 <tr><td><a href="lnc/STRG.49.1.html" target="_blank">STRG.49.1</a></td><td>OK/SW-cl.16</td><td>uc009vfa.1</td><td>Atpase6</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
77 <tr><td><a href="lnc/STRG.45.1.html" target="_blank">STRG.45.1</a></td><td>TVAS5</td><td>uc009vew.1</td><td>AK018753</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
78 <tr><td><a href="lnc/STRG.51.1.html" target="_blank">STRG.51.1</a></td><td>MTND5</td><td>uc009vfc.1</td><td>Cytb</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
79 </tbody>
80 </table>
81 </div>
82 </body>
83 </html>