Mercurial > repos > trinity_ctat > ctat_lncrna
comparison test-data/slncky/reads.simPE.filtered_info.txt.sorted @ 0:a940c4a36a43 draft default tip
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author | trinity_ctat |
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date | Tue, 17 Jul 2018 11:49:16 -0400 |
parents | |
children |
comparison
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-1:000000000000 | 0:a940c4a36a43 |
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1 STRG.10.1 aligns to STRG.43.1 with 89.5% identity and 99.3% coverage. Appears to be duplication. | |
2 STRG.10.1 aligns to STRG.7.1 with 90.1% identity and 98.9% coverage. Appears to be duplication. | |
3 STRG.11.1 transcript entirely within coding transcript NM_173666 | |
4 STRG.1.1 aligns to STRG.46.1 with 98.5% identity and 99.9% coverage. Appears to be duplication. | |
5 STRG.12.1 transcript entirely within coding transcript uc011dmq.2 | |
6 STRG.13.1 100.0% exonic overlap with coding transcript NM_005345 | |
7 STRG.14.1 100.0% exonic overlap with coding transcript uc003nxk.2 | |
8 STRG.15.2 aligns to STRG.22.1 with 99.4% identity and 100.0% coverage. Appears to be duplication. | |
9 STRG.15.2 aligns to STRG.6.1 with 97.0% identity and 100.0% coverage. Appears to be duplication. | |
10 STRG.16.1 100.0% exonic overlap with coding transcript NM_001003806 | |
11 STRG.17.1 aligns to mm9 coding transcript NM_133900 with 65.4% exonic identity | |
12 STRG.17.1 aligns to mm9 coding transcript uc008zth.2 with 65.4% exonic identity | |
13 STRG.18.1 100.0% exonic overlap with coding transcript uc003tzi.4 | |
14 STRG.19.1 200.0% exonic overlap with coding transcript uc003ubx.4 | |
15 STRG.20.1 99.8% exonic overlap with coding transcript NM_198085 | |
16 STRG.21.1 transcript entirely within coding transcript NM_001164750 | |
17 STRG.21.2 transcript entirely within coding transcript uc011leg.2 | |
18 STRG.2.1 aligns to STRG.47.1 with 98.6% identity and 99.9% coverage. Appears to be duplication. | |
19 STRG.22.1 aligns to STRG.15.2 with 99.4% identity and 100.0% coverage. Appears to be duplication. | |
20 STRG.22.1 aligns to STRG.6.1 with 97.1% identity and 100.0% coverage. Appears to be duplication. | |
21 STRG.24.1 32.7% exonic overlap with coding transcript uc001ocx.3 | |
22 STRG.26.1 100.0% exonic overlap with coding transcript uc001oiw.2 | |
23 STRG.27.1 100.0% exonic overlap with coding transcript uc001oja.3 | |
24 STRG.29.1 100.0% exonic overlap with coding transcript NM_001014449 | |
25 STRG.30.1 37.4% exonic overlap with coding transcript uc002fnn.2 | |
26 STRG.31.1 transcript entirely within coding transcript NM_000978 | |
27 STRG.31.2 transcript entirely within coding transcript uc002hqx.1 | |
28 STRG.31.3 71.4% exonic overlap with coding transcript uc002hqy.1 | |
29 STRG.3.1 aligns to STRG.48.1 with 98.2% identity and 99.9% coverage. Appears to be duplication. | |
30 STRG.32.1 40.2% exonic overlap with coding transcript uc002hrq.1 | |
31 STRG.33.1 97.7% exonic overlap with coding transcript NM_198993 | |
32 STRG.34.1 35.7% exonic overlap with coding transcript uc002hsq.3 | |
33 STRG.35.1 transcript entirely within coding transcript NM_001075099 | |
34 STRG.36.1 20.8% exonic overlap with coding transcript uc002iyw.4 | |
35 STRG.37.1 99.8% exonic overlap with coding transcript uc002klr.3 | |
36 STRG.38.1 transcript entirely within coding transcript NM_001003652 | |
37 STRG.39.1 32.6% exonic overlap with coding transcript NM_004152 | |
38 STRG.40.1 88.6% exonic overlap with coding transcript NM_002967 | |
39 STRG.41.1 99.6% exonic overlap with coding transcript NM_014649 | |
40 STRG.43.1 aligns to STRG.10.1 with 89.5% identity and 99.3% coverage. Appears to be duplication. | |
41 STRG.43.1 aligns to STRG.7.1 with 90.7% identity and 100.0% coverage. Appears to be duplication. | |
42 STRG.46.1 aligns to STRG.1.1 with 98.5% identity and 99.9% coverage. Appears to be duplication. | |
43 STRG.47.1 aligns to STRG.2.1 with 98.6% identity and 99.9% coverage. Appears to be duplication. | |
44 STRG.48.1 aligns to STRG.3.1 with 98.2% identity and 99.9% coverage. Appears to be duplication. | |
45 STRG.6.1 aligns to STRG.15.2 with 97.0% identity and 100.0% coverage. Appears to be duplication. | |
46 STRG.6.1 aligns to STRG.22.1 with 97.1% identity and 100.0% coverage. Appears to be duplication. | |
47 STRG.7.1 aligns to STRG.10.1 with 90.1% identity and 98.9% coverage. Appears to be duplication. | |
48 STRG.7.1 aligns to STRG.43.1 with 90.7% identity and 100.0% coverage. Appears to be duplication. | |
49 STRG.9.1 transcript entirely within coding transcript NM_020357 |