Mercurial > repos > trinity_ctat > ctat_lncrna
diff test-data/slncky/reads.simPE.orthologs.txt.sorted @ 0:a940c4a36a43 draft default tip
Upload ctat tools.
author | trinity_ctat |
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date | Tue, 17 Jul 2018 11:49:16 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/slncky/reads.simPE.orthologs.txt.sorted Tue Jul 17 11:49:16 2018 -0400 @@ -0,0 +1,10 @@ +#lnc lncGeneSymbol ortholog orthologGeneSymbol alignScore exonID locusID indelRate(exon) indelRate(intron) lncExonsAligned orthExonsAligned spliceConserved spliceTotal category(hg19) category(mm9) +STRG.25.1 MALAT1 cast.naive_gene.v2.1_1455.0_chr19 Malat1 455430 0.60 0.64 0.048 NA 1, 1,2, 0.0 0 intergenic intergenic +STRG.25.1 MALAT1 uc008gfj.2 Malat1 455430 0.63 0.63 0.049 NA 1, 1, 0.0 0 intergenic intergenic +STRG.44.1 TVAS5 uc009vew.1 AK018753 726896 0.00 -0.00 NA NA NA NA 0.0 0 intergenic intergenic +STRG.45.1 TVAS5 uc009vew.1 AK018753 726896 0.00 -0.00 NA NA NA NA 0.0 0 intergenic intergenic +STRG.48.2 OK/SW-cl.16 uc009vez.1 Cox2 726896 0.00 -0.00 NA NA NA NA 0.0 0 intergenic intergenic +STRG.49.1 OK/SW-cl.16 uc009vfa.1 Atpase6 726896 0.00 -0.00 NA NA NA NA 0.0 0 intergenic intergenic +STRG.51.1 MTND5 uc009vfc.1 Cytb 726896 0.00 -0.00 NA NA NA NA 0.0 0 intergenic intergenic +STRG.5.1 Unannotated uc009vfa.1 Atpase6 281595 0.00 0.00 NA NA NA NA 0.0 0 intergenic intergenic +STRG.52.1 JA760615 uc012hdm.1 BC071253 726896 0.00 -0.00 NA NA NA NA 0.0 0 intergenic intergenic