Mercurial > repos > trinity_ctat > ctat_lncrna
view test-data/slncky/reads.simPE.filtered_info.txt.sorted @ 0:a940c4a36a43 draft default tip
Upload ctat tools.
| author | trinity_ctat |
|---|---|
| date | Tue, 17 Jul 2018 11:49:16 -0400 |
| parents | |
| children |
line wrap: on
line source
STRG.10.1 aligns to STRG.43.1 with 89.5% identity and 99.3% coverage. Appears to be duplication. STRG.10.1 aligns to STRG.7.1 with 90.1% identity and 98.9% coverage. Appears to be duplication. STRG.11.1 transcript entirely within coding transcript NM_173666 STRG.1.1 aligns to STRG.46.1 with 98.5% identity and 99.9% coverage. Appears to be duplication. STRG.12.1 transcript entirely within coding transcript uc011dmq.2 STRG.13.1 100.0% exonic overlap with coding transcript NM_005345 STRG.14.1 100.0% exonic overlap with coding transcript uc003nxk.2 STRG.15.2 aligns to STRG.22.1 with 99.4% identity and 100.0% coverage. Appears to be duplication. STRG.15.2 aligns to STRG.6.1 with 97.0% identity and 100.0% coverage. Appears to be duplication. STRG.16.1 100.0% exonic overlap with coding transcript NM_001003806 STRG.17.1 aligns to mm9 coding transcript NM_133900 with 65.4% exonic identity STRG.17.1 aligns to mm9 coding transcript uc008zth.2 with 65.4% exonic identity STRG.18.1 100.0% exonic overlap with coding transcript uc003tzi.4 STRG.19.1 200.0% exonic overlap with coding transcript uc003ubx.4 STRG.20.1 99.8% exonic overlap with coding transcript NM_198085 STRG.21.1 transcript entirely within coding transcript NM_001164750 STRG.21.2 transcript entirely within coding transcript uc011leg.2 STRG.2.1 aligns to STRG.47.1 with 98.6% identity and 99.9% coverage. Appears to be duplication. STRG.22.1 aligns to STRG.15.2 with 99.4% identity and 100.0% coverage. Appears to be duplication. STRG.22.1 aligns to STRG.6.1 with 97.1% identity and 100.0% coverage. Appears to be duplication. STRG.24.1 32.7% exonic overlap with coding transcript uc001ocx.3 STRG.26.1 100.0% exonic overlap with coding transcript uc001oiw.2 STRG.27.1 100.0% exonic overlap with coding transcript uc001oja.3 STRG.29.1 100.0% exonic overlap with coding transcript NM_001014449 STRG.30.1 37.4% exonic overlap with coding transcript uc002fnn.2 STRG.31.1 transcript entirely within coding transcript NM_000978 STRG.31.2 transcript entirely within coding transcript uc002hqx.1 STRG.31.3 71.4% exonic overlap with coding transcript uc002hqy.1 STRG.3.1 aligns to STRG.48.1 with 98.2% identity and 99.9% coverage. Appears to be duplication. STRG.32.1 40.2% exonic overlap with coding transcript uc002hrq.1 STRG.33.1 97.7% exonic overlap with coding transcript NM_198993 STRG.34.1 35.7% exonic overlap with coding transcript uc002hsq.3 STRG.35.1 transcript entirely within coding transcript NM_001075099 STRG.36.1 20.8% exonic overlap with coding transcript uc002iyw.4 STRG.37.1 99.8% exonic overlap with coding transcript uc002klr.3 STRG.38.1 transcript entirely within coding transcript NM_001003652 STRG.39.1 32.6% exonic overlap with coding transcript NM_004152 STRG.40.1 88.6% exonic overlap with coding transcript NM_002967 STRG.41.1 99.6% exonic overlap with coding transcript NM_014649 STRG.43.1 aligns to STRG.10.1 with 89.5% identity and 99.3% coverage. Appears to be duplication. STRG.43.1 aligns to STRG.7.1 with 90.7% identity and 100.0% coverage. Appears to be duplication. STRG.46.1 aligns to STRG.1.1 with 98.5% identity and 99.9% coverage. Appears to be duplication. STRG.47.1 aligns to STRG.2.1 with 98.6% identity and 99.9% coverage. Appears to be duplication. STRG.48.1 aligns to STRG.3.1 with 98.2% identity and 99.9% coverage. Appears to be duplication. STRG.6.1 aligns to STRG.15.2 with 97.0% identity and 100.0% coverage. Appears to be duplication. STRG.6.1 aligns to STRG.22.1 with 97.1% identity and 100.0% coverage. Appears to be duplication. STRG.7.1 aligns to STRG.10.1 with 90.1% identity and 98.9% coverage. Appears to be duplication. STRG.7.1 aligns to STRG.43.1 with 90.7% identity and 100.0% coverage. Appears to be duplication. STRG.9.1 transcript entirely within coding transcript NM_020357