annotate predict/ct_to_dot.py @ 112:87ec0ecdc2af draft

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author tyty
date Sun, 12 Apr 2015 14:28:30 -0400
parents 43ea205aa49e
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1 #!/usr/bin/env python
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2 # -*- coding: utf-8 -*-
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3
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4 import sys
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5 import shlex
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6 import os
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7 import subprocess
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8 from read_file import *
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10 ct_file = sys.argv[1]
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11 path = sys.argv[2]
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12 id_s = sys.argv[3]
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13 result_file = sys.argv[4]
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15 h = file(result_file, 'w')
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16 os.system('grep "'+id_s+'" '+ct_file+' |wc -l > '+path+'/count.txt')
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17 count = read_t_file(path+'/count.txt')
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18 comm = ''
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19 for i in range(int(count[0][0])):
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20 command = shlex.split('ct2dot %s %s %s' % (ct_file, str(i+1), os.path.join(path, 'db_file_%s.dbnn' % str(i+1))))
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21 subprocess.call(command)
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22 comm = comm +' '+path+'/db_file_'+str(i+1)+'.dbnn'
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26 os.system('cat'+comm+' > '+result_file)
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27 for i in range(int(count[0][0])):
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28 command = shlex.split('rm %s' % (os.path.join(path, 'db_file_%s.dbnn' % str(i+1))))
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29 subprocess.call(command)
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30 command = shlex.split('rm %s' % (os.path.join(path, 'count.txt')))
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31 subprocess.call(command)
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35 h.close()
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