# HG changeset patch # User devteam # Date 1416871290 18000 # Node ID bd02fcf26f7a43a9bcd1461d2cc32eac0c1d5fac # Parent fb80870002a3a70933883ecf8b809d6d593162ce Uploaded wrapper that correctly handles structure prediction without constraints. diff -r fb80870002a3 -r bd02fcf26f7a predict/predict_RNAs.py --- a/predict/predict_RNAs.py Fri Nov 21 16:51:01 2014 -0500 +++ b/predict/predict_RNAs.py Mon Nov 24 18:21:30 2014 -0500 @@ -55,7 +55,7 @@ fh.write(seqs[id_s]) fh.close() if not flag: - command = shlex.split('Fold %s %s' % (os.path.join(syspath, temp.txt), os.path.join(output_directory, '%s.ct' % id_s))) + command = shlex.split('Fold %s %s' % (os.path.join(syspath, 'temp.txt'), os.path.join(output_directory, '%s.ct' % id_s))) subprocess.call(command) else: if id_s in react: